RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 FAAP100Q0VG06 881 aa7.8□□□□□ -1.16
CCDC66-221ENST00000487739 MSMPQ1L6U9 139 aa7.8□□□□□ -1.16
CCDC66-221ENST00000487739 DTHD1Q6ZMT9 781 aa7.8□□□□□ -1.16
CCDC66-221ENST00000487739 GSX1Q9H4S2 264 aaPredicted RBP7.8□□□□□ -1.16
CCDC66-221ENST00000487739 ANGEL1Q9UNK9 670 aaKnown RBP7.8□□□□□ -1.16
CCDC66-221ENST00000487739 TIMELESSQ9UNS1 1208 aa7.8□□□□□ -1.16
CCDC66-221ENST00000487739 CYP26A1O43174 497 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
CCDC66-221ENST00000487739 MAPK1P28482 360 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 ZNF157P51786 506 aaPredicted RBP7.79□□□□□ -1.16
CCDC66-221ENST00000487739 FCGRTP55899 365 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 CYP27A1Q02318 531 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 PPP2R3AQ06190 1150 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 SHISA5Q8N114 240 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 GATA6Q92908 595 aa7.79□□□□□ -1.16
CCDC66-221ENST00000487739 GPN3Q9UHW5 284 aaPredicted RBP7.79□□□□□ -1.16
CCDC66-221ENST00000487739 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
CCDC66-221ENST00000487739 DUSP27Q5VZP5 1158 aa7.78□□□□□ -1.16
CCDC66-221ENST00000487739 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
CCDC66-221ENST00000487739 PNMA6FA0A0J9YX94 578 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 PAX4O43316 350 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 GSTP1P09211 210 aaKnown RBP7.77□□□□□ -1.17
CCDC66-221ENST00000487739 LIG1P18858 919 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 DSC3Q14574 896 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 PI16Q6UXB8 463 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 BCO2Q9BYV7 579 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
CCDC66-221ENST00000487739 CCDC86Q9H6F5 360 aaKnown RBP7.77□□□□□ -1.17
CCDC66-221ENST00000487739 KRT82Q9NSB4 513 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 TMEM39AQ9NV64 488 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 PPP1R9AQ9ULJ8 1098 aa7.77□□□□□ -1.17
CCDC66-221ENST00000487739 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 TREHO43280 583 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 PRNPP04156 253 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 SLFN14P0C7P3 912 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 PLCB3Q01970 1234 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 ENOX2Q16206 610 aaKnown RBP7.76□□□□□ -1.17
CCDC66-221ENST00000487739 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 ATXN3LQ9H3M9 355 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 PIDD1Q9HB75 910 aa7.76□□□□□ -1.17
CCDC66-221ENST00000487739 ID3Q02535 119 aa7.75□□□□□ -1.17
CCDC66-221ENST00000487739 KIF4BQ2VIQ3 1234 aa7.75□□□□□ -1.17
CCDC66-221ENST00000487739 SEZ6L2Q6UXD5 910 aa7.75□□□□□ -1.17
CCDC66-221ENST00000487739 ZNF765Q7L2R6 523 aa7.75□□□□□ -1.17
CCDC66-221ENST00000487739 WDR89Q96FK6 387 aaPredicted RBP7.75□□□□□ -1.17
CCDC66-221ENST00000487739 BSDC1Q9NW68 430 aaPredicted RBP7.75□□□□□ -1.17
CCDC66-221ENST00000487739 CRIM1Q9NZV1 1036 aa7.75□□□□□ -1.17
CCDC66-221ENST00000487739 CCDC39Q9UFE4 941 aa7.75□□□□□ -1.17
CCDC66-221ENST00000487739 ZNF862O60290 1169 aa7.74□□□□□ -1.17
CCDC66-221ENST00000487739 TAL1P17542 331 aaPredicted RBP7.74□□□□□ -1.17
CCDC66-221ENST00000487739 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC66-221ENST00000487739 LRRC4CQ9HCJ2 640 aa7.74□□□□□ -1.17
CCDC66-221ENST00000487739 C1GALT1Q9NS00 363 aa7.74□□□□□ -1.17
CCDC66-221ENST00000487739 AKAP2Q9Y2D5 859 aa7.74□□□□□ -1.17
CCDC66-221ENST00000487739 DYNC1LI2O43237 492 aaPredicted RBP7.73□□□□□ -1.17
CCDC66-221ENST00000487739 NXPE4Q6UWF7 544 aa7.73□□□□□ -1.17
CCDC66-221ENST00000487739 SULF2Q8IWU5 870 aa7.73□□□□□ -1.17
CCDC66-221ENST00000487739 KCNB2Q92953 911 aa7.73□□□□□ -1.17
CCDC66-221ENST00000487739 FBXL18Q96ME1 805 aa7.73□□□□□ -1.17
CCDC66-221ENST00000487739 FANCD2OSQ96PS1 177 aa7.73□□□□□ -1.17
CCDC66-221ENST00000487739 LGR6Q9HBX8 967 aa7.73□□□□□ -1.17
CCDC66-221ENST00000487739 OGFOD3Q6PK18 319 aa7.72□□□□□ -1.17
CCDC66-221ENST00000487739 PDZD3Q86UT5 571 aa7.72□□□□□ -1.17
CCDC66-221ENST00000487739 ZSCAN29Q8IWY8 852 aaPredicted RBP7.72□□□□□ -1.17
CCDC66-221ENST00000487739 ABI1Q8IZP0 508 aa7.72□□□□□ -1.17
CCDC66-221ENST00000487739 FBF1Q8TES7 1133 aa7.72□□□□□ -1.17
CCDC66-221ENST00000487739 ADGRE2Q9UHX3 823 aa7.72□□□□□ -1.17
CCDC66-221ENST00000487739 PCDHGC5Q9Y5F6 944 aa7.72□□□□□ -1.17
CCDC66-221ENST00000487739 CYP27C1Q4G0S4 372 aa7.71□□□□□ -1.18
CCDC66-221ENST00000487739 SMYD4Q8IYR2 804 aaPredicted RBP7.71□□□□□ -1.18
CCDC66-221ENST00000487739 EMILIN2Q9BXX0 1053 aa7.71□□□□□ -1.18
CCDC66-221ENST00000487739 SRCIN1Q9C0H9 1055 aa7.71□□□□□ -1.18
CCDC66-221ENST00000487739 ZC3H7BQ9UGR2 993 aaKnown RBP7.71□□□□□ -1.18
CCDC66-221ENST00000487739 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
CCDC66-221ENST00000487739 NME2P22392 152 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 ARNTP27540 789 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 GSTT1P30711 240 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 MAPK8P45983 427 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 FMR1Q06787 632 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCDC66-221ENST00000487739 KCNA1Q09470 495 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 TP53INP2Q8IXH6 220 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 FLCNQ8NFG4 579 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 DISC1Q9NRI5 854 aa7.7□□□□□ -1.18
CCDC66-221ENST00000487739 RNGTTO60942 597 aaKnown RBP7.69□□□□□ -1.18
CCDC66-221ENST00000487739 CDK5R2Q13319 367 aa7.69□□□□□ -1.18
CCDC66-221ENST00000487739 TTLL4Q14679 1199 aa7.69□□□□□ -1.18
CCDC66-221ENST00000487739 NFXL1Q6ZNB6 911 aa7.69□□□□□ -1.18
CCDC66-221ENST00000487739 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
CCDC66-221ENST00000487739 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
CCDC66-221ENST00000487739 KRTAP4-12Q9BQ66 201 aa7.69□□□□□ -1.18
CCDC66-221ENST00000487739 FAM87AP0C7U9 286 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 HCLS1P14317 486 aaPredicted RBP7.68□□□□□ -1.18
CCDC66-221ENST00000487739 TXKP42681 527 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
CCDC66-221ENST00000487739 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 AGBL5Q8NDL9 886 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 ASB16Q96NS5 453 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 CEP44Q9C0F1 390 aa7.68□□□□□ -1.18
CCDC66-221ENST00000487739 PPM1HQ9ULR3 514 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms