RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TNNI2P48788 182 aa15.15■□□□□ 0.02
TRIM56-204ENST00000487252 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
TRIM56-204ENST00000487252 DZIP1LQ8IYY4 767 aaKnown RBP15.15■□□□□ 0.02
TRIM56-204ENST00000487252 CHL1O00533 1208 aa15.14■□□□□ 0.01
TRIM56-204ENST00000487252 FOSL2P15408 326 aa15.14■□□□□ 0.01
TRIM56-204ENST00000487252 MYD88Q99836 296 aa15.14■□□□□ 0.01
TRIM56-204ENST00000487252 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
TRIM56-204ENST00000487252 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
TRIM56-204ENST00000487252 USP38Q8NB14 1042 aa15.13■□□□□ 0.01
TRIM56-204ENST00000487252 SNX27Q96L92 541 aa15.13■□□□□ 0.01
TRIM56-204ENST00000487252 HMGCRP04035 888 aa15.12■□□□□ 0.01
TRIM56-204ENST00000487252 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
TRIM56-204ENST00000487252 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
TRIM56-204ENST00000487252 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-204ENST00000487252 LTBP2Q14767 1821 aa15.12■□□□□ 0.01
TRIM56-204ENST00000487252 MAST2Q6P0Q8 1798 aa15.11■□□□□ 0.01
TRIM56-204ENST00000487252 SNAP23O00161 211 aa15.11■□□□□ 0.01
TRIM56-204ENST00000487252 INPP5BP32019 993 aa15.11■□□□□ 0.01
TRIM56-204ENST00000487252 SMAD3P84022 425 aaKnown RBP15.11■□□□□ 0.01
TRIM56-204ENST00000487252 CHRNDQ07001 517 aa15.11■□□□□ 0.01
TRIM56-204ENST00000487252 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
TRIM56-204ENST00000487252 ZNF112Q9UJU3 913 aa15.11■□□□□ 0.01
TRIM56-204ENST00000487252 TTF2Q9UNY4 1162 aaKnown RBP15.11■□□□□ 0.01
TRIM56-204ENST00000487252 RPAP1Q9BWH6 1393 aaPredicted RBP15.11■□□□□ 0.01
TRIM56-204ENST00000487252 KCNJ4P48050 445 aa15.1■□□□□ 0.01
TRIM56-204ENST00000487252 ZNF804AQ7Z570 1209 aa15.1■□□□□ 0.01
TRIM56-204ENST00000487252 FAM83AQ86UY5 434 aa15.1■□□□□ 0.01
TRIM56-204ENST00000487252 HOOK2Q96ED9 719 aa15.1■□□□□ 0.01
TRIM56-204ENST00000487252 METTL22Q9BUU2 404 aaPredicted RBP15.1■□□□□ 0.01
TRIM56-204ENST00000487252 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
TRIM56-204ENST00000487252 SLC45A1Q9Y2W3 748 aa15.1■□□□□ 0.01
TRIM56-204ENST00000487252 CXCL11O14625 94 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 CRKP46108 304 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 RIPK4P57078 832 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 MAP3K21Q5TCX8 1036 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 FKBP1CQ5VVH2 108 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 ATXN2LQ8WWM7 1075 aaKnown RBP15.09■□□□□ 0.01
TRIM56-204ENST00000487252 COA7Q96BR5 231 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
TRIM56-204ENST00000487252 MAPK8IP3Q9UPT6 1336 aa15.09■□□□□ 0.01
TRIM56-204ENST00000487252 TRIM32Q13049 653 aa15.08■□□□□ 0
TRIM56-204ENST00000487252 SHHQ15465 462 aa15.08■□□□□ 0
TRIM56-204ENST00000487252 MFSD14BQ5SR56 506 aa15.08■□□□□ 0
TRIM56-204ENST00000487252 NOL9Q5SY16 702 aaKnown RBP15.08■□□□□ 0
TRIM56-204ENST00000487252 DCAF15Q66K64 600 aa15.08■□□□□ 0
TRIM56-204ENST00000487252 C1QTNF1Q9BXJ1 281 aa15.08■□□□□ 0
TRIM56-204ENST00000487252 ZNF341Q9BYN7 854 aa15.08■□□□□ 0
TRIM56-204ENST00000487252 ITGA6P23229 1130 aa15.07■□□□□ 0
TRIM56-204ENST00000487252 ADAMTS19Q8TE59 1207 aa15.07■□□□□ 0
TRIM56-204ENST00000487252 MPHOSPH8Q99549 860 aa15.07■□□□□ 0
TRIM56-204ENST00000487252 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
TRIM56-204ENST00000487252 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
TRIM56-204ENST00000487252 GJD2Q9UKL4 321 aa15.07■□□□□ 0
TRIM56-204ENST00000487252 PLXNB2O15031 1838 aa15.07■□□□□ 0
TRIM56-204ENST00000487252 PTPRFP10586 1907 aa15.07■□□□□ 0
TRIM56-204ENST00000487252 A0A0G2JLL6 359 aaPredicted RBP15.06■□□□□ 0
TRIM56-204ENST00000487252 TAF5LO75529 589 aa15.06■□□□□ 0
TRIM56-204ENST00000487252 IGKV5-2P06315 115 aa15.06■□□□□ 0
TRIM56-204ENST00000487252 CACNB3P54284 484 aa15.06■□□□□ 0
TRIM56-204ENST00000487252 HDLBPQ00341 1268 aaKnown RBP15.06■□□□□ 0
TRIM56-204ENST00000487252 PRRT2Q7Z6L0 340 aaPredicted RBP15.06■□□□□ 0
TRIM56-204ENST00000487252 TDRD7Q8NHU6 1098 aaKnown RBP15.06■□□□□ 0
TRIM56-204ENST00000487252 ASB2Q96Q27 587 aa15.06■□□□□ 0
TRIM56-204ENST00000487252 PLA2G12BQ9BX93 195 aa15.06■□□□□ 0
TRIM56-204ENST00000487252 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
TRIM56-204ENST00000487252 CSF1RP07333 972 aa15.05■□□□□ -0
TRIM56-204ENST00000487252 C9orf50Q5SZB4 431 aa15.05■□□□□ -0
TRIM56-204ENST00000487252 DUSP27Q5VZP5 1158 aa15.05■□□□□ -0
TRIM56-204ENST00000487252 MIGA2Q7L4E1 593 aa15.05■□□□□ -0
TRIM56-204ENST00000487252 FASTKD5Q7L8L6 764 aaKnown RBP15.05■□□□□ -0
TRIM56-204ENST00000487252 MUC6Q6W4X9 2439 aa15.05■□□□□ -0
TRIM56-204ENST00000487252 H7C1W4 665 aa15.04■□□□□ -0
TRIM56-204ENST00000487252 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
TRIM56-204ENST00000487252 LHX8Q68G74 356 aa15.04■□□□□ -0
TRIM56-204ENST00000487252 TRIB2Q92519 343 aa15.04■□□□□ -0
TRIM56-204ENST00000487252 UHRF1Q96T88 793 aaPredicted RBP15.04■□□□□ -0
TRIM56-204ENST00000487252 AK9Q5TCS8 1911 aa15.04■□□□□ -0
TRIM56-204ENST00000487252 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
TRIM56-204ENST00000487252 GRIK5Q16478 980 aa15.03■□□□□ -0
TRIM56-204ENST00000487252 FAM110CQ1W6H9 321 aa15.03■□□□□ -0
TRIM56-204ENST00000487252 MRIQ9BWK5 157 aa15.03■□□□□ -0
TRIM56-204ENST00000487252 HCN4Q9Y3Q4 1203 aa15.03■□□□□ -0
TRIM56-204ENST00000487252 XIRP2A4UGR9 3374 aa15.02■□□□□ -0
TRIM56-204ENST00000487252 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
TRIM56-204ENST00000487252 GRIN2CQ14957 1233 aa15.02■□□□□ -0
TRIM56-204ENST00000487252 APOBEC3HQ6NTF7 200 aaKnown RBP15.02■□□□□ -0
TRIM56-204ENST00000487252 ANKRD13CQ8N6S4 541 aa15.02■□□□□ -0
TRIM56-204ENST00000487252 ZDHHC15Q96MV8 337 aa15.02■□□□□ -0
TRIM56-204ENST00000487252 FRMPD3Q5JV73 1810 aa15.01□□□□□ -0.01
TRIM56-204ENST00000487252 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
TRIM56-204ENST00000487252 SMCR8Q8TEV9 937 aaPredicted RBP15.01□□□□□ -0.01
TRIM56-204ENST00000487252 LRFN3Q9BTN0 628 aa15.01□□□□□ -0.01
TRIM56-204ENST00000487252 PHIPQ8WWQ0 1821 aa15.01□□□□□ -0.01
TRIM56-204ENST00000487252 CASP7P55210 303 aa15□□□□□ -0.01
TRIM56-204ENST00000487252 THEGQ9P2T0 379 aa15□□□□□ -0.01
TRIM56-204ENST00000487252 MAP3K2Q9Y2U5 619 aa15□□□□□ -0.01
TRIM56-204ENST00000487252 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
TRIM56-204ENST00000487252 MRPS5P82675 430 aaKnown RBP14.99□□□□□ -0.01
TRIM56-204ENST00000487252 UBE3BQ7Z3V4 1068 aa14.99□□□□□ -0.01
TRIM56-204ENST00000487252 TEKT1Q969V4 418 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms