RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 CCDC30Q5VVM6 783 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 DDX46Q7L014 1031 aaKnown RBP8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 JDP2Q8WYK2 163 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 MYD88Q99836 296 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 ISCA1Q9BUE6 129 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 PLA2G2EQ9NZK7 142 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 GJA3Q9Y6H8 435 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 COL4A5P29400 1685 aa8.3□□□□□ -1.08
SOX2-OT-210ENST00000487240 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 GRAPQ13588 217 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 AOC3Q16853 763 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 DPP8Q6V1X1 898 aaPredicted RBP8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 FAM9BQ8IZU0 186 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 GRAPLQ8TC17 118 aaPredicted RBP8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 ATP6V0A2Q9Y487 856 aa8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 DDX60Q8IY21 1712 aaKnown RBP8.29□□□□□ -1.08
SOX2-OT-210ENST00000487240 TAF1P21675 1872 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 USP17L5A8MUK1 530 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 FZD9O00144 591 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 IRS4O14654 1257 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 BBOX1O75936 387 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 SLC19A1P41440 591 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 TWISTNBQ3B726 338 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 NIM1KQ8IY84 436 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 PHTF2Q8N3S3 785 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 MPNDQ8N594 471 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 DNAJC5GQ8N7S2 189 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 STK31Q9BXU1 1019 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 TAF1DQ9H5J8 278 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 HACL1Q9UJ83 578 aa8.28□□□□□ -1.08
SOX2-OT-210ENST00000487240 USP17L3A6NCW0 530 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 USP17L4A6NCW7 530 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 EPHX2P34913 555 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 TRIM28Q13263 835 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 RNF20Q5VTR2 975 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 G2E3Q7L622 706 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 USP17L1Q7RTZ2 530 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 GPC2Q8N158 579 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 PLPP7Q8NBV4 271 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 SUPT20HQ8NEM7 779 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 CELF1Q92879 486 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 CCDC85AQ96PX6 553 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 CWC25Q9NXE8 425 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 MAP3K2Q9Y2U5 619 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 IL16Q14005 1332 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 FANCIQ9NVI1 1328 aa8.27□□□□□ -1.09
SOX2-OT-210ENST00000487240 SCN4AP35499 1836 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 PI4KAP2A4QPH2 592 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 SF3B3Q15393 1217 aaKnown RBP8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 LDHDQ86WU2 507 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 PLEKHM2Q8IWE5 1019 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 PI4KAP1Q8N8J0 262 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 ZBTB38Q8NAP3 1195 aaPredicted RBP8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 CCDC191Q8NCU4 936 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 KLRG1Q96E93 195 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 METTL22Q9BUU2 404 aaPredicted RBP8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 SEC31BQ9NQW1 1179 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 COL4A1P02462 1669 aa8.26□□□□□ -1.09
SOX2-OT-210ENST00000487240 ESPNB1AK53 854 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 PCCAP05165 728 aaPredicted RBP8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 EPS15P42566 896 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 GPSM2P81274 684 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 EXOSC9Q06265 439 aaKnown RBP8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 NEXNQ0ZGT2 675 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 MAP7D1Q3KQU3 841 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 KSR2Q6VAB6 950 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 VASH1Q7L8A9 365 aaPredicted RBP8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 WDR63Q8IWG1 891 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 DEPDC4Q8N2C3 294 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 RTFDC1Q9BY42 306 aaPredicted RBP8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 VRTNQ9H8Y1 702 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 ZNRF3Q9ULT6 936 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 NSFL1CQ9UNZ2 370 aaKnown RBP8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 DOLKQ9UPQ8 538 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
SOX2-OT-210ENST00000487240 LTBP1Q14766 1721 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 DUOX1Q9NRD9 1551 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 PDE8AO60658 829 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 RAD17O75943 681 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 IGKV5-2P06315 115 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 HSP90B1P14625 803 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 SCNN1DP51172 638 aa8.24□□□□□ -1.09
SOX2-OT-210ENST00000487240 RPS8P62241 208 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms