RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
EPHB4-206ENST00000487222 CFAP58Q5T655 872 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 FMNL3Q8IVF7 1028 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 TTF2Q9UNY4 1162 aaKnown RBP16.56■□□□□ 0.24
EPHB4-206ENST00000487222 FANCCQ00597 558 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 MICALL1Q8N3F8 863 aa16.56■□□□□ 0.24
EPHB4-206ENST00000487222 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
EPHB4-206ENST00000487222 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 FAM76AQ8TAV0 307 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 IFT81Q8WYA0 676 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 APPBP2Q92624 585 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 CUTAO60888 179 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 ZNF174Q15697 407 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 MLKLQ8NB16 471 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 PPP1R9BQ96SB3 815 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 MPHOSPH6Q99547 160 aaKnown RBP16.55■□□□□ 0.24
EPHB4-206ENST00000487222 PAIP2Q9BPZ3 127 aaKnown RBP16.55■□□□□ 0.24
EPHB4-206ENST00000487222 IMPG2Q9BZV3 1241 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 ATP10AO60312 1499 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 B4E1Z4 1266 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
EPHB4-206ENST00000487222 RPL13P26373 211 aaKnown RBP16.55■□□□□ 0.24
EPHB4-206ENST00000487222 TBC1D8BQ0IIM8 1120 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 MYRIPQ8NFW9 859 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 ANKRD2Q9GZV1 360 aa16.55■□□□□ 0.24
EPHB4-206ENST00000487222 MTRF1LQ9UGC7 380 aaKnown RBP16.55■□□□□ 0.24
EPHB4-206ENST00000487222 F8W031 263 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 ZEB2O60315 1214 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 CCDC6Q16204 474 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 SV2BQ7L1I2 683 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 PPM1EQ8WY54 764 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 NAPGQ99747 312 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 CPLX4Q7Z7G2 160 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 SREK1Q8WXA9 508 aaKnown RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 GTF3C6Q969F1 213 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 CCDC97Q96F63 343 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 PLIN2Q99541 437 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 TM6SF1Q9BZW5 370 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 BRD1O95696 1058 aa16.54■□□□□ 0.24
EPHB4-206ENST00000487222 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-206ENST00000487222 SELENOSQ9BQE4 189 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 NCOA5Q9HCD5 579 aaKnown RBP16.53■□□□□ 0.24
EPHB4-206ENST00000487222 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 LDHBP07195 334 aaKnown RBP16.53■□□□□ 0.24
EPHB4-206ENST00000487222 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
EPHB4-206ENST00000487222 IGSF3O75054 1194 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 HSPA2P54652 639 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 GADD45BO75293 160 aaPredicted RBP16.53■□□□□ 0.24
EPHB4-206ENST00000487222 FERP16591 822 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 GSTA5Q7RTV2 222 aa16.53■□□□□ 0.24
EPHB4-206ENST00000487222 DIS3L2Q8IYB7 885 aaKnown RBP16.53■□□□□ 0.24
EPHB4-206ENST00000487222 CYP26C1Q6V0L0 522 aa16.52■□□□□ 0.24
EPHB4-206ENST00000487222 DENND2AQ9ULE3 1009 aa16.52■□□□□ 0.24
EPHB4-206ENST00000487222 CTNND2Q9UQB3 1225 aa16.52■□□□□ 0.24
EPHB4-206ENST00000487222 KIF21AQ7Z4S6 1674 aa16.52■□□□□ 0.24
EPHB4-206ENST00000487222 PTPRTO14522 1441 aa16.52■□□□□ 0.24
EPHB4-206ENST00000487222 VPS16Q9H269 839 aa16.52■□□□□ 0.24
EPHB4-206ENST00000487222 USP19O94966 1318 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 ARHGAP6O43182 974 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 ZNF202O95125 648 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 NLRP12P59046 1061 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.23
EPHB4-206ENST00000487222 HDAC9Q9UKV0 1011 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 TRAF5O00463 557 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 PARP1P09874 1014 aaKnown RBP16.52■□□□□ 0.23
EPHB4-206ENST00000487222 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.23
EPHB4-206ENST00000487222 DNAJC21Q5F1R6 531 aaKnown RBP16.52■□□□□ 0.23
EPHB4-206ENST00000487222 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.23
EPHB4-206ENST00000487222 TLDC2A0PJX2 215 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
EPHB4-206ENST00000487222 COMMD10Q9Y6G5 202 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 GPAA1O43292 621 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 PLCB3Q01970 1234 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 CALCOCO2Q13137 446 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 POLR2DO15514 142 aaKnown RBP16.51■□□□□ 0.23
EPHB4-206ENST00000487222 PDE4DQ08499 809 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 FAM89AQ96GI7 184 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 TCHPQ9BT92 498 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms