RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 IGFLR1Q9H665 355 aa8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 PHLPP1O60346 1717 aa8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 COL16A1Q07092 1604 aaPredicted RBP8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 TMEM94Q12767 1356 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 C2CD2LO14523 706 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 EDN3P14138 238 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 MX2P20592 715 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 SOX18P35713 384 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 TBC1D8BQ0IIM8 1120 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 WAPLQ7Z5K2 1190 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 SYT9Q86SS6 491 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 NSUN5Q96P11 429 aaKnown RBP8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 BACH2Q9BYV9 841 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 LATS2Q9NRM7 1088 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 SALL4Q9UJQ4 1053 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 MYOM2P54296 1465 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 CLSPNQ9HAW4 1339 aa8.75□□□□□ -1.01
RTFDC1-209ENST00000487211 COL13A1Q5TAT6 717 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-209ENST00000487211 ZNF468Q5VIY5 522 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-209ENST00000487211 ZNF787Q6DD87 383 aa8.74□□□□□ -1.01
RTFDC1-209ENST00000487211 UBE2OQ9C0C9 1292 aaKnown RBP8.74□□□□□ -1.01
RTFDC1-209ENST00000487211 C12orf49Q9H741 205 aa8.74□□□□□ -1.01
RTFDC1-209ENST00000487211 JCADQ9P266 1359 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 H3BM21 787 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 GIPC1O14908 333 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 TCF3P15923 654 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 PRELPP51888 382 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 NRLP54845 237 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 PCBP4P57723 403 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 MLLT1Q03111 559 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 NPAS3Q8IXF0 933 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 BCO2Q9BYV7 579 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 OSBPL7Q9BZF2 842 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 TRAK1Q9UPV9 953 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 IFT172Q9UG01 1749 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 LRPPRCP42704 1394 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 ABCC11Q96J66 1382 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
RTFDC1-209ENST00000487211 PRAG1Q86YV5 1406 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 A0A1W2PP55 124 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 HOXD8P13378 290 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 GAS6Q14393 721 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 KIAA0319Q5VV43 1072 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 PEAR1Q5VY43 1037 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 NXPE4Q6UWF7 544 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 SPACA7Q96KW9 195 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 EHD4Q9H223 541 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 SUV39H2Q9H5I1 410 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 C19orf44Q9H6X5 657 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 IGSF5Q9NSI5 407 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 DIP2AQ14689 1571 aa8.72□□□□□ -1.01
RTFDC1-209ENST00000487211 YTHDC2Q9H6S0 1430 aaKnown RBP8.71□□□□□ -1.01
RTFDC1-209ENST00000487211 ASXL1Q8IXJ9 1541 aa8.71□□□□□ -1.01
RTFDC1-209ENST00000487211 KIF4AO95239 1232 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 ACPPP15309 386 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 GPLD1P80108 840 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 GRM2Q14416 872 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 TRPM4Q8TD43 1214 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 PLEKHH1Q9ULM0 1364 aa8.71□□□□□ -1.02
RTFDC1-209ENST00000487211 NWD1Q149M9 1564 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 LOC102724428A0A0B4J2F2 783 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 ZBTB42B2RXF5 422 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 J3QW42 95 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 SIN3BO75182 1162 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 SIK1P57059 783 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 SAFB2Q14151 953 aaKnown RBP eCLIP8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 LDLRAD1Q5T700 205 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 CEP120Q8N960 986 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 PRAM1Q96QH2 718 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 OSMRQ99650 979 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 PPP4R2Q9NY27 417 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 FAM8A1Q9UBU6 413 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-209ENST00000487211 ADGRB1O14514 1584 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 TRPA1O75762 1119 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 CTSHP09668 335 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 MAP2K3P46734 347 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 PCSK7Q16549 785 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 ZKSCAN3Q9BRR0 538 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 COL25A1Q9BXS0 654 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 LIN7BQ9HAP6 207 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 AVENQ9NQS1 362 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 TECPR2O15040 1411 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 SHPRHQ149N8 1683 aa8.69□□□□□ -1.02
RTFDC1-209ENST00000487211 TERTO14746 1132 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 SCAMP3O14828 347 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms