RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 MIGA2Q7L4E1 593 aa15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 CCDC191Q8NCU4 936 aa15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 ASB2Q96Q27 587 aa15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 TTF2Q9UNY4 1162 aaKnown RBP15.8■□□□□ 0.12
ATPAF1-205ENST00000487193 HMGCRP04035 888 aa15.79■□□□□ 0.12
ATPAF1-205ENST00000487193 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
ATPAF1-205ENST00000487193 ATXN2LQ8WWM7 1075 aaKnown RBP15.79■□□□□ 0.12
ATPAF1-205ENST00000487193 PLEKHF1Q96S99 279 aa15.79■□□□□ 0.12
ATPAF1-205ENST00000487193 HYPKQ9NX55 129 aa15.79■□□□□ 0.12
ATPAF1-205ENST00000487193 KCNH4Q9UQ05 1017 aa15.79■□□□□ 0.12
ATPAF1-205ENST00000487193 SERPINA10Q9UK55 444 aa15.78■□□□□ 0.12
ATPAF1-205ENST00000487193 TAF5LO75529 589 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 COL6A1P12109 1028 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 IL1R1P14778 569 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 SMAD3P84022 425 aaKnown RBP15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 CHRNDQ07001 517 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 GRIN2CQ14957 1233 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 ZNF804AQ7Z570 1209 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 IL27Q8NEV9 243 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 MPHOSPH8Q99549 860 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 LRFN3Q9BTN0 628 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 ZNF341Q9BYN7 854 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
ATPAF1-205ENST00000487193 PPP2R1AP30153 589 aa15.76■□□□□ 0.11
ATPAF1-205ENST00000487193 CRKP46108 304 aa15.76■□□□□ 0.11
ATPAF1-205ENST00000487193 DCAF15Q66K64 600 aa15.76■□□□□ 0.11
ATPAF1-205ENST00000487193 PRKAG2Q9UGJ0 569 aa15.76■□□□□ 0.11
ATPAF1-205ENST00000487193 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
ATPAF1-205ENST00000487193 MRPS5P82675 430 aaKnown RBP15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 PDE3AQ14432 1141 aa15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 GADL1Q6ZQY3 521 aa15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 SMCR8Q8TEV9 937 aaPredicted RBP15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 HOOK2Q96ED9 719 aa15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 NECAB3Q96P71 396 aaPredicted RBP15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
ATPAF1-205ENST00000487193 MYH3P11055 1940 aa15.74■□□□□ 0.11
ATPAF1-205ENST00000487193 MAPK8IP3Q9UPT6 1336 aa15.74■□□□□ 0.11
ATPAF1-205ENST00000487193 RIPK4P57078 832 aa15.74■□□□□ 0.11
ATPAF1-205ENST00000487193 THEGQ9P2T0 379 aa15.74■□□□□ 0.11
ATPAF1-205ENST00000487193 TCF20Q9UGU0 1960 aaKnown RBP15.73■□□□□ 0.11
ATPAF1-205ENST00000487193 ITGA6P23229 1130 aa15.73■□□□□ 0.11
ATPAF1-205ENST00000487193 SENP6Q9GZR1 1112 aaPredicted RBP15.73■□□□□ 0.11
ATPAF1-205ENST00000487193 DNAH12Q6ZR08 3092 aa15.73■□□□□ 0.11
ATPAF1-205ENST00000487193 CXCL11O14625 94 aa15.72■□□□□ 0.11
ATPAF1-205ENST00000487193 ATN1P54259 1190 aaPredicted RBP15.72■□□□□ 0.11
ATPAF1-205ENST00000487193 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
ATPAF1-205ENST00000487193 EPHX3Q9H6B9 360 aa15.72■□□□□ 0.11
ATPAF1-205ENST00000487193 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
ATPAF1-205ENST00000487193 CCDC85BQ15834 202 aaPredicted RBP15.71■□□□□ 0.11
ATPAF1-205ENST00000487193 C15orf52Q6ZUT6 534 aaKnown RBP15.71■□□□□ 0.11
ATPAF1-205ENST00000487193 TRIB2Q92519 343 aa15.71■□□□□ 0.11
ATPAF1-205ENST00000487193 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
ATPAF1-205ENST00000487193 PIAS4Q8N2W9 510 aaPredicted RBP15.7■□□□□ 0.1
ATPAF1-205ENST00000487193 METTL22Q9BUU2 404 aaPredicted RBP15.7■□□□□ 0.1
ATPAF1-205ENST00000487193 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
ATPAF1-205ENST00000487193 GJD2Q9UKL4 321 aa15.7■□□□□ 0.1
ATPAF1-205ENST00000487193 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
ATPAF1-205ENST00000487193 LTBP2Q14767 1821 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 CYP2B6P20813 491 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 GRIK5Q16478 980 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 FAM83AQ86UY5 434 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 BADQ92934 168 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 ZNF112Q9UJU3 913 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 ZHX2Q9Y6X8 837 aa15.69■□□□□ 0.1
ATPAF1-205ENST00000487193 A0A0G2JLL6 359 aaPredicted RBP15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 CHL1O00533 1208 aa15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 PLIN1O60240 522 aa15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 MRE11P49959 708 aa15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 TMEM31Q5JXX7 168 aa15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 LHX8Q68G74 356 aa15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 PRRT2Q7Z6L0 340 aaPredicted RBP15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 PRDM5Q9NQX1 630 aaPredicted RBP15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 BDP1A6H8Y1 2624 aa15.68■□□□□ 0.1
ATPAF1-205ENST00000487193 MAST2Q6P0Q8 1798 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 CCND3P30281 292 aaPredicted RBP15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 RTP1P59025 263 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 MAP3K21Q5TCX8 1036 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 DUSP27Q5VZP5 1158 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 GAS2L1Q99501 681 aaPredicted RBP15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 ZNF576Q9H609 170 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 ATP11BQ9Y2G3 1177 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
ATPAF1-205ENST00000487193 HOXB7P09629 217 aa15.66■□□□□ 0.1
ATPAF1-205ENST00000487193 CACNB2Q08289 660 aaPredicted RBP15.66■□□□□ 0.1
ATPAF1-205ENST00000487193 NOL9Q5SY16 702 aaKnown RBP15.66■□□□□ 0.1
ATPAF1-205ENST00000487193 P2RX7Q99572 595 aaKnown RBP15.66■□□□□ 0.1
ATPAF1-205ENST00000487193 IGKV5-2P06315 115 aa15.65■□□□□ 0.1
ATPAF1-205ENST00000487193 FAM110CQ1W6H9 321 aa15.65■□□□□ 0.1
ATPAF1-205ENST00000487193 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
ATPAF1-205ENST00000487193 TDRD7Q8NHU6 1098 aaKnown RBP15.65■□□□□ 0.1
ATPAF1-205ENST00000487193 TEKT1Q969V4 418 aa15.65■□□□□ 0.1
ATPAF1-205ENST00000487193 RNPC3Q96LT9 517 aaKnown RBP15.65■□□□□ 0.1
ATPAF1-205ENST00000487193 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms