RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 LPIN2Q92539 896 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 DCTPP1Q9H773 170 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 ELP3Q9H9T3 547 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 TTF2Q9UNY4 1162 aaKnown RBP16.07■□□□□ 0.16
NR1H3-223ENST00000486991 PPP2R3BQ9Y5P8 575 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 MYH2Q9UKX2 1941 aa16.06■□□□□ 0.16
NR1H3-223ENST00000486991 TCP10L2B9ZVM9 353 aa16.06■□□□□ 0.16
NR1H3-223ENST00000486991 IFIT1P09914 478 aaKnown RBP16.06■□□□□ 0.16
NR1H3-223ENST00000486991 ZBTB48P10074 688 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-223ENST00000486991 ATP2B3Q16720 1220 aa16.06■□□□□ 0.16
NR1H3-223ENST00000486991 HSP90AB4PQ58FF6 505 aa16.06■□□□□ 0.16
NR1H3-223ENST00000486991 OTOP1Q7RTM1 612 aa16.06■□□□□ 0.16
NR1H3-223ENST00000486991 CD99L2Q8TCZ2 262 aa16.06■□□□□ 0.16
NR1H3-223ENST00000486991 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
NR1H3-223ENST00000486991 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 ALDH1A1P00352 501 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 SLC5A1P13866 664 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 ADORA1P30542 326 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 IREB2P48200 963 aaKnown RBP16.05■□□□□ 0.16
NR1H3-223ENST00000486991 INHBEP58166 350 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 CHAF1AQ13111 956 aaPredicted RBP16.05■□□□□ 0.16
NR1H3-223ENST00000486991 CRHR2Q13324 411 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 PRPF38BQ5VTL8 546 aaKnown RBP16.05■□□□□ 0.16
NR1H3-223ENST00000486991 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 TMEM39BQ9GZU3 492 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 CEP126Q9P2H0 1117 aa16.05■□□□□ 0.16
NR1H3-223ENST00000486991 MYO5AQ9Y4I1 1855 aaKnown RBP16.04■□□□□ 0.16
NR1H3-223ENST00000486991 ZBTB22O15209 634 aa16.04■□□□□ 0.16
NR1H3-223ENST00000486991 FRAT2O75474 233 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-223ENST00000486991 CACNB3P54284 484 aa16.04■□□□□ 0.16
NR1H3-223ENST00000486991 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-223ENST00000486991 OPTNQ96CV9 577 aa16.04■□□□□ 0.16
NR1H3-223ENST00000486991 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
NR1H3-223ENST00000486991 MKI67P46013 3256 aaKnown RBP16.04■□□□□ 0.16
NR1H3-223ENST00000486991 RAB11FIP3O75154 756 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 PHKA1P46020 1223 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 CRKP46108 304 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-223ENST00000486991 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 ANKRD13AQ8IZ07 590 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 SERPINA10Q9UK55 444 aa16.03■□□□□ 0.16
NR1H3-223ENST00000486991 TFCP2Q12800 502 aa16.02■□□□□ 0.16
NR1H3-223ENST00000486991 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
NR1H3-223ENST00000486991 TBC1D22AQ8WUA7 517 aa16.02■□□□□ 0.16
NR1H3-223ENST00000486991 MS4A4AQ96JQ5 239 aa16.02■□□□□ 0.16
NR1H3-223ENST00000486991 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
NR1H3-223ENST00000486991 TESPA1A2RU30 521 aaPredicted RBP16.01■□□□□ 0.15
NR1H3-223ENST00000486991 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
NR1H3-223ENST00000486991 BRI3BPQ8WY22 251 aa16.01■□□□□ 0.15
NR1H3-223ENST00000486991 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
NR1H3-223ENST00000486991 LRRCC1Q9C099 1032 aa16.01■□□□□ 0.15
NR1H3-223ENST00000486991 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
NR1H3-223ENST00000486991 A0A1B0GUL7 405 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
NR1H3-223ENST00000486991 TIMM10P62072 90 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 HDLBPQ00341 1268 aaKnown RBP16■□□□□ 0.15
NR1H3-223ENST00000486991 VGLL4Q14135 290 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 CCDC102BQ68D86 513 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 ERO1AQ96HE7 468 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 SUGT1Q9Y2Z0 365 aa16■□□□□ 0.15
NR1H3-223ENST00000486991 SALL1Q9NSC2 1324 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 UNCXA6NJT0 531 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 SP3Q02447 781 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 TNFAIP1Q13829 316 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 OTUD5Q96G74 571 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 EFCC1Q9HA90 598 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 BRCA2P51587 3418 aa15.99■□□□□ 0.15
NR1H3-223ENST00000486991 PDS5AQ29RF7 1337 aaKnown RBP15.98■□□□□ 0.15
NR1H3-223ENST00000486991 MAST2Q6P0Q8 1798 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 CCL15-CCL14A0A0B4J2E2 113 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 ECM2O94769 699 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-223ENST00000486991 EN2P19622 333 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-223ENST00000486991 PRDX5P30044 214 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 CCL15Q16663 113 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 OTUD7BQ6GQQ9 843 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 APOBEC3HQ6NTF7 200 aaKnown RBP15.98■□□□□ 0.15
NR1H3-223ENST00000486991 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.98■□□□□ 0.15
NR1H3-223ENST00000486991 WDR66Q8TBY9 1149 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 XAGE2Q96GT9 111 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 ZDHHC15Q96MV8 337 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
NR1H3-223ENST00000486991 GNL3LQ9NVN8 582 aaKnown RBP15.98■□□□□ 0.15
NR1H3-223ENST00000486991 CDK5RAP2Q96SN8 1893 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 ZSWIM8A7E2V4 1837 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 SEMA3EO15041 775 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 NUCB1Q02818 461 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 TAF1CQ15572 869 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-223ENST00000486991 HHIPL2Q6UWX4 724 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 CHD1LQ86WJ1 897 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
NR1H3-223ENST00000486991 ZKSCAN4Q969J2 545 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-223ENST00000486991 TEKT1Q969V4 418 aa15.97■□□□□ 0.15
NR1H3-223ENST00000486991 LNPKQ9C0E8 428 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms