RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 AIDAQ96BJ3 306 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 STRBPQ96SI9 672 aaKnown RBP11.51□□□□□ -0.57
MCF2L-227ENST00000486806 MYOZ2Q9NPC6 264 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
MCF2L-227ENST00000486806 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 WDR90Q96KV7 1748 aa11.51□□□□□ -0.57
MCF2L-227ENST00000486806 BAG3O95817 575 aa11.5□□□□□ -0.57
MCF2L-227ENST00000486806 EGFRP00533 1210 aa11.5□□□□□ -0.57
MCF2L-227ENST00000486806 MFAP1P55081 439 aaKnown RBP11.5□□□□□ -0.57
MCF2L-227ENST00000486806 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
MCF2L-227ENST00000486806 BACH2Q9BYV9 841 aa11.5□□□□□ -0.57
MCF2L-227ENST00000486806 LSG1Q9H089 658 aaKnown RBP11.5□□□□□ -0.57
MCF2L-227ENST00000486806 ARMT1Q9H993 441 aa11.5□□□□□ -0.57
MCF2L-227ENST00000486806 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
MCF2L-227ENST00000486806 DDX60LQ5H9U9 1706 aaKnown RBP11.49□□□□□ -0.57
MCF2L-227ENST00000486806 WNT10BO00744 389 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 SEC24BO95487 1268 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 PLCG2P16885 1265 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 GNAT2P19087 354 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 VPS53Q5VIR6 699 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 CDC42EP5Q6NZY7 148 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 SH3RF3Q8TEJ3 882 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-227ENST00000486806 PRMT6Q96LA8 375 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-227ENST00000486806 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-227ENST00000486806 ZMYM6O95789 1325 aa11.49□□□□□ -0.57
MCF2L-227ENST00000486806 RPAP1Q9BWH6 1393 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-227ENST00000486806 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 POTECB2RU33 542 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
MCF2L-227ENST00000486806 PRKAB2O43741 272 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 WDHD1O75717 1129 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-227ENST00000486806 REC8O95072 547 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 HSPD1P10809 573 aaKnown RBP11.48□□□□□ -0.57
MCF2L-227ENST00000486806 EPS15P42566 896 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
MCF2L-227ENST00000486806 DLGAP5Q15398 846 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
MCF2L-227ENST00000486806 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
MCF2L-227ENST00000486806 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
MCF2L-227ENST00000486806 FLT1P17948 1338 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 H7C1D1 291 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
MCF2L-227ENST00000486806 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-227ENST00000486806 PTH1RQ03431 593 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 TBC1D10BQ4KMP7 808 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-227ENST00000486806 GIMAP6Q6P9H5 292 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 TEX11Q8IYF3 940 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 SDR42E1Q8WUS8 393 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 MAP4K1Q92918 833 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
MCF2L-227ENST00000486806 ADARB2Q9NS39 739 aaKnown RBP11.47□□□□□ -0.57
MCF2L-227ENST00000486806 HACL1Q9UJ83 578 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
MCF2L-227ENST00000486806 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 IQCA1LA6NCM1 817 aa11.46□□□□□ -0.57
MCF2L-227ENST00000486806 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 HIRAP54198 1017 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 NFIAQ12857 509 aa11.46□□□□□ -0.57
MCF2L-227ENST00000486806 ALX1Q15699 326 aa11.46□□□□□ -0.57
MCF2L-227ENST00000486806 TDRD3Q9H7E2 651 aaKnown RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 DCP1AQ9NPI6 582 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 DDX4Q9NQI0 724 aaKnown RBP11.46□□□□□ -0.57
MCF2L-227ENST00000486806 ATP8A2Q9NTI2 1148 aa11.46□□□□□ -0.57
MCF2L-227ENST00000486806 USP40Q9NVE5 1235 aa11.46□□□□□ -0.57
MCF2L-227ENST00000486806 ASTN2O75129 1339 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-227ENST00000486806 SCN4AP35499 1836 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 CLRN2A0PK11 232 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 EPHX2P34913 555 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 CACNB3P54284 484 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 IFNL3Q8IZI9 196 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 TGFBRAP1Q8WUH2 860 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 USP26Q9BXU7 913 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 TAF1DQ9H5J8 278 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-227ENST00000486806 ZNF70Q9UC06 446 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-227ENST00000486806 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
MCF2L-227ENST00000486806 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 ATRNL1Q5VV63 1379 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 PITPNM2Q9BZ72 1349 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 MYO1BO43795 1136 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 FGAP02671 866 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 USP5P45974 858 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 RBM26Q5T8P6 1007 aaKnown RBP11.44□□□□□ -0.58
MCF2L-227ENST00000486806 USP50Q70EL3 339 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-227ENST00000486806 MAPKAPK5Q8IW41 473 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 NACAP1Q9BZK3 213 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 OSBPL5Q9H0X9 879 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-227ENST00000486806 ARPP21Q9UBL0 812 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-227ENST00000486806 RBM8AQ9Y5S9 174 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms