RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	CRY2	Q49AN0	593 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	CCDC30	Q5VVM6	783 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	ABHD8	Q96I13	439 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	RBM17	Q96I25	401 aa	Known RBP	9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	CDK15	Q96Q40	435 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	CHMP4A	Q9BY43	222 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	PRDM10	Q9NQV6	1147 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	AAAS	Q9NRG9	546 aa		9.03	□□□□□ -0.96
PUDP-204	ENST00000486446	GLTPD2	A6NH11	291 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	CCDC85C	A6NKD9	419 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	PLIN1	O60240	522 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	HOXA10	P31260	410 aa	Predicted RBP	9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	CTC1	Q2NKJ3	1217 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	SLC10A5	Q5PT55	438 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	OLFM4	Q6UX06	510 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	RTKN2	Q8IZC4	609 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	C7orf43	Q8WVR3	580 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	HPS1	Q92902	700 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	CRAMP1	Q96RY5	1269 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	TMX4	Q9H1E5	349 aa	Predicted RBP	9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	PHAX	Q9H814	394 aa	Known RBP	9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	TLL2	Q9Y6L7	1015 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	SH3TC1	Q8TE82	1336 aa		9.02	□□□□□ -0.97
PUDP-204	ENST00000486446	DDX58	O95786	925 aa	Known RBP	9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	HCLS1	P14317	486 aa	Predicted RBP	9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	AGER	Q15109	404 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	TWISTNB	Q3B726	338 aa	Predicted RBP	9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	CC2D2B	Q6DHV5	1058 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	SYNE4	Q8N205	404 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	TSPYL6	Q8N831	410 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	ISCA1	Q9BUE6	129 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	STK31	Q9BXU1	1019 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	ZNF277	Q9NRM2	450 aa	Predicted RBP	9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	DICER1	Q9UPY3	1922 aa	Known RBP	9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	LAMB2	P55268	1798 aa		9.01	□□□□□ -0.97
PUDP-204	ENST00000486446	ST8SIA5	O15466	376 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	BCAR3	O75815	825 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	VEGFA	P15692	232 aa	Predicted RBP	9	□□□□□ -0.97
PUDP-204	ENST00000486446	TMEM132A	Q24JP5	1023 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	ALDH1L2	Q3SY69	923 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	C20orf194	Q5TEA3	1177 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	TRMT44	Q8IYL2	757 aa	Known RBP	9	□□□□□ -0.97
PUDP-204	ENST00000486446	MYD88	Q99836	296 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	OCSTAMP	Q9BR26	566 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	MKRN1	Q9UHC7	482 aa	Known RBP	9	□□□□□ -0.97
PUDP-204	ENST00000486446	GPSM3	Q9Y4H4	160 aa		9	□□□□□ -0.97
PUDP-204	ENST00000486446	IARS	P41252	1262 aa	Known RBP	8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	CTCF	P49711	727 aa	Predicted RBP	8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	DDX46	Q7L014	1031 aa	Known RBP	8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	ARHGAP45	Q92619	1136 aa		8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	AIDA	Q96BJ3	306 aa		8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	FAM89A	Q96GI7	184 aa		8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	DDX60	Q8IY21	1712 aa	Known RBP	8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	ABCC4	O15439	1325 aa		8.99	□□□□□ -0.97
PUDP-204	ENST00000486446	IRS4	O14654	1257 aa	Predicted RBP	8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	IPO8	O15397	1037 aa	Known RBP	8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	BBOX1	O75936	387 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	DDN	O94850	711 aa	Predicted RBP	8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	GRM5	P41594	1212 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	RGS19	P49795	217 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	LBX1	P52954	281 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	TRIM28	Q13263	835 aa	Known RBP	8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	MTMR14	Q8NCE2	650 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	PNMA1	Q8ND90	353 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	JDP2	Q8WYK2	163 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	PSMD1	Q99460	953 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	METTL22	Q9BUU2	404 aa	Predicted RBP	8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	SNRK	Q9NRH2	765 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	MAP3K2	Q9Y2U5	619 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	ATP6V0A2	Q9Y487	856 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	WASF2	Q9Y6W5	498 aa		8.98	□□□□□ -0.97
PUDP-204	ENST00000486446	AXIN1	O15169	862 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	ADH1C	P00326	375 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	PTK2	Q05397	1052 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	EXOSC9	Q06265	439 aa	Known RBP	8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	NEXN	Q0ZGT2	675 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	GRAP	Q13588	217 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	KSR2	Q6VAB6	950 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	SLC51A	Q86UW1	340 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	LARGE2	Q8N3Y3	721 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	CCDC191	Q8NCU4	936 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	GRAPL	Q8TC17	118 aa	Predicted RBP	8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	ARHGAP9	Q9BRR9	750 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	CHMP4B	Q9H444	224 aa	Known RBP	8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	CWC25	Q9NXE8	425 aa	Predicted RBP	8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	MAP4K5	Q9Y4K4	846 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	ZNF541	Q9H0D2	1346 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	SNED1	Q8TER0	1413 aa		8.97	□□□□□ -0.97
PUDP-204	ENST00000486446	MAGEB6P1	A0A0J9YX57	407 aa		8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	PI4KAP2	A4QPH2	592 aa		8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	PPIP5K2	O43314	1243 aa		8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	HSP90B1	P14625	803 aa	Known RBP	8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	EIF6	P56537	245 aa	Known RBP	8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	SF3B3	Q15393	1217 aa	Known RBP	8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	ZKSCAN2	Q63HK3	967 aa		8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	DPP8	Q6V1X1	898 aa	Predicted RBP	8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	G2E3	Q7L622	706 aa		8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	SP8	Q8IXZ3	490 aa		8.96	□□□□□ -0.98
PUDP-204	ENST00000486446	NIM1K	Q8IY84	436 aa		8.96	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms