RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 HDAC9Q9UKV0 1011 aa15.81■□□□□ 0.12
VTI1BP1-201ENST00000486325 GSG1L2A8MUP6 293 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 PSMD14O00487 310 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 RAD17O75943 681 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 DYNLL1P63167 89 aaKnown RBP15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 DIXDC1Q155Q3 683 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 OGFOD1Q8N543 542 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 KIF2CQ99661 725 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 TM6SF1Q9BZW5 370 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 NAPBQ9H115 298 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
VTI1BP1-201ENST00000486325 F8W031 263 aaPredicted RBP15.79■□□□□ 0.12
VTI1BP1-201ENST00000486325 ZNF213O14771 459 aa15.79■□□□□ 0.12
VTI1BP1-201ENST00000486325 RPS12P25398 132 aaKnown RBP15.79■□□□□ 0.12
VTI1BP1-201ENST00000486325 CXCL9Q07325 125 aa15.79■□□□□ 0.12
VTI1BP1-201ENST00000486325 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
VTI1BP1-201ENST00000486325 MXD3Q9BW11 206 aa15.79■□□□□ 0.12
VTI1BP1-201ENST00000486325 FZD9O00144 591 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 GRIN3BO60391 1043 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 BTDP43251 543 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 CRKP46108 304 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 TDO2P48775 406 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 RASSF7Q02833 373 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 BECN1Q14457 450 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 RASEFQ8IZ41 740 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 GMLQ99445 158 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 DAGLAQ9Y4D2 1042 aa15.78■□□□□ 0.12
VTI1BP1-201ENST00000486325 MAST2Q6P0Q8 1798 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 FOXP2O15409 715 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 PRKAB2O43741 272 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 ST18O60284 1047 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 CYP21A2P08686 494 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 HMGB1P09429 215 aaKnown RBP15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 USP5P45974 858 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 PALD1Q9ULE6 856 aa15.77■□□□□ 0.12
VTI1BP1-201ENST00000486325 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 USP17L8P0C7I0 530 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 SCNN1DP51172 638 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 RBM5P52756 815 aaKnown RBP eCLIP15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 GPR162Q16538 588 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 TEX11Q8IYF3 940 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 DPF2Q92785 391 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 SNX21Q969T3 373 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 SCN9AQ15858 1988 aa15.76■□□□□ 0.11
VTI1BP1-201ENST00000486325 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 MCM2P49736 904 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 NEK4P51957 841 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 SBK1Q52WX2 424 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 NEK1Q96PY6 1258 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 ZSWIM6Q9HCJ5 1215 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 USP40Q9NVE5 1235 aa15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
VTI1BP1-201ENST00000486325 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 PCP11498 1178 aaKnown RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 RHBDL3P58872 404 aa15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 TRDNQ13061 729 aa15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 BLOC1S2Q6QNY1 142 aa15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 MTMR14Q8NCE2 650 aa15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 TGFBRAP1Q8WUH2 860 aa15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 JAKMIP1Q96N16 626 aaKnown RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 RNF41Q9H4P4 317 aaPredicted RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 EPB41L4AQ9HCS5 686 aaPredicted RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 ARPP21Q9UBL0 812 aaPredicted RBP15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
VTI1BP1-201ENST00000486325 PSME4Q14997 1843 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 E7EWF7 191 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 CASTP20810 708 aaKnown RBP15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 NT5C2P49902 561 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 PRELPP51888 382 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 DLGAP5Q15398 846 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 CFAP100Q494V2 611 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 RUFY3Q7L099 469 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 IPO9Q96P70 1041 aaKnown RBP15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 CNNM2Q9H8M5 875 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 MKRN1Q9UHC7 482 aaKnown RBP15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 COL4A5P29400 1685 aa15.73■□□□□ 0.11
VTI1BP1-201ENST00000486325 MINDY4BA8MYZ0 360 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 USP17L21D6R901 530 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 PPARAQ07869 468 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 CDC42EP5Q6NZY7 148 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 CTR9Q6PD62 1173 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 MFSD6Q6ZSS7 791 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 HSCBQ8IWL3 235 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 NCOA7Q8NI08 942 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 KRT23Q9C075 422 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 ALDH8A1Q9H2A2 487 aaPredicted RBP15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 MCM9Q9NXL9 1143 aa15.72■□□□□ 0.11
VTI1BP1-201ENST00000486325 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
VTI1BP1-201ENST00000486325 HAND2P61296 217 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms