RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC4A4Q9Y6R1 1079 aa14.04□□□□□ -0.16
PKP4-213ENST00000486254 MAGEB6P1A0A0J9YX57 407 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 KLF18A0A0U1RQI7 1052 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 GOLGA8BA8MQT2 603 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 H3BQV1 296 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 FGRP09769 529 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 IFFO2Q5TF58 517 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 TMTC2Q8N394 836 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 RAI14Q9P0K7 980 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
PKP4-213ENST00000486254 NEDD4P46934 1319 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 STK36Q9NRP7 1315 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 BBOX1O75936 387 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 SERPINB2P05120 415 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 TDO2P48775 406 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.16
PKP4-213ENST00000486254 PPP2R5BQ15173 497 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 CPLX2Q6PUV4 134 aaKnown RBP14.02□□□□□ -0.16
PKP4-213ENST00000486254 APOA5Q6Q788 366 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 MFSD6Q6ZSS7 791 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 WDR66Q8TBY9 1149 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 IGDCC4Q8TDY8 1250 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.16
PKP4-213ENST00000486254 NSUN4Q96CB9 384 aaKnown RBP14.02□□□□□ -0.16
PKP4-213ENST00000486254 PODXL2Q9NZ53 605 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.16
PKP4-213ENST00000486254 TNS1Q9HBL0 1735 aaKnown RBP14.01□□□□□ -0.17
PKP4-213ENST00000486254 FIBPO43427 364 aa14.01□□□□□ -0.17
PKP4-213ENST00000486254 TRIM37O94972 964 aa14.01□□□□□ -0.17
PKP4-213ENST00000486254 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
PKP4-213ENST00000486254 RBM17Q96I25 401 aaKnown RBP14.01□□□□□ -0.17
PKP4-213ENST00000486254 LY9Q9HBG7 655 aa14.01□□□□□ -0.17
PKP4-213ENST00000486254 ABCF2Q9UG63 623 aa14.01□□□□□ -0.17
PKP4-213ENST00000486254 NSFL1CQ9UNZ2 370 aaKnown RBP14.01□□□□□ -0.17
PKP4-213ENST00000486254 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
PKP4-213ENST00000486254 B4E1Z4 1266 aa14□□□□□ -0.17
PKP4-213ENST00000486254 POLRMTO00411 1230 aaKnown RBP14□□□□□ -0.17
PKP4-213ENST00000486254 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
PKP4-213ENST00000486254 ATP2B4P23634 1241 aa14□□□□□ -0.17
PKP4-213ENST00000486254 PPARAQ07869 468 aa14□□□□□ -0.17
PKP4-213ENST00000486254 CYB5R4Q7L1T6 521 aa14□□□□□ -0.17
PKP4-213ENST00000486254 ZNF804AQ7Z570 1209 aa14□□□□□ -0.17
PKP4-213ENST00000486254 ADGRA1Q86SQ6 560 aa14□□□□□ -0.17
PKP4-213ENST00000486254 GDPD2Q9HCC8 539 aa14□□□□□ -0.17
PKP4-213ENST00000486254 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
PKP4-213ENST00000486254 CPLX1O14810 134 aa14□□□□□ -0.17
PKP4-213ENST00000486254 FDPSP14324 419 aaKnown RBP14□□□□□ -0.17
PKP4-213ENST00000486254 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
PKP4-213ENST00000486254 CHST3Q7LGC8 479 aa14□□□□□ -0.17
PKP4-213ENST00000486254 TTC6Q86TZ1 520 aa14□□□□□ -0.17
PKP4-213ENST00000486254 PROM2Q8N271 834 aa14□□□□□ -0.17
PKP4-213ENST00000486254 NLGN1Q8N2Q7 840 aa14□□□□□ -0.17
PKP4-213ENST00000486254 ZNF384Q8TF68 577 aa14□□□□□ -0.17
PKP4-213ENST00000486254 AKT1S1Q96B36 256 aa14□□□□□ -0.17
PKP4-213ENST00000486254 NCOA5Q9HCD5 579 aaKnown RBP14□□□□□ -0.17
PKP4-213ENST00000486254 ATP8A2Q9NTI2 1148 aa14□□□□□ -0.17
PKP4-213ENST00000486254 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 PRKAB2O43741 272 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 KLRK1P26718 216 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 METAP2P50579 478 aaKnown RBP eCLIP13.99□□□□□ -0.17
PKP4-213ENST00000486254 GSTO1P78417 241 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 MECOMQ03112 1051 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 DDR1Q08345 913 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 SBK1Q52WX2 424 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 FBXO18Q8NFZ0 1043 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 LEO1Q8WVC0 666 aaPredicted RBP13.99□□□□□ -0.17
PKP4-213ENST00000486254 DDX11Q96FC9 970 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
PKP4-213ENST00000486254 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
PKP4-213ENST00000486254 ANKIB1Q9P2G1 1089 aa13.99□□□□□ -0.17
PKP4-213ENST00000486254 ZBTB43O43298 467 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 ORC4O43929 436 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
PKP4-213ENST00000486254 FERMT3Q86UX7 667 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 MIGA1Q8NAN2 632 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 ESR2Q92731 530 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 SPATA32Q96LK8 384 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
PKP4-213ENST00000486254 ZSWIM5Q9P217 1185 aa13.98□□□□□ -0.17
PKP4-213ENST00000486254 RBM27Q9P2N5 1060 aaKnown RBP13.98□□□□□ -0.17
PKP4-213ENST00000486254 ARPP21Q9UBL0 812 aaPredicted RBP13.98□□□□□ -0.17
PKP4-213ENST00000486254 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
PKP4-213ENST00000486254 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
PKP4-213ENST00000486254 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
PKP4-213ENST00000486254 SYCE3A1L190 88 aa13.97□□□□□ -0.17
PKP4-213ENST00000486254 WTIPA6NIX2 430 aaPredicted RBP13.97□□□□□ -0.17
PKP4-213ENST00000486254 KDM4AO75164 1064 aa13.97□□□□□ -0.17
PKP4-213ENST00000486254 IL1R1P14778 569 aa13.97□□□□□ -0.17
PKP4-213ENST00000486254 ADD1P35611 737 aaKnown RBP13.97□□□□□ -0.17
PKP4-213ENST00000486254 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
PKP4-213ENST00000486254 RCOR1Q9UKL0 485 aa13.97□□□□□ -0.17
PKP4-213ENST00000486254 ROBO3Q96MS0 1386 aa13.97□□□□□ -0.17
PKP4-213ENST00000486254 ECM29Q5VYK3 1845 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms