RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 E7EWF7 191 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
COL9A1-207ENST00000486080 PSMA5P28066 241 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 KRT32Q14532 448 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 DACT2Q5SW24 774 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
COL9A1-207ENST00000486080 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 NAPBQ9H115 298 aa17.17■□□□□ 0.34
COL9A1-207ENST00000486080 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 ZNF213O14771 459 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 LDHCP07864 332 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 TDO2P48775 406 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 NEK1Q96PY6 1258 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
COL9A1-207ENST00000486080 TTF2Q9UNY4 1162 aaKnown RBP17.16■□□□□ 0.34
COL9A1-207ENST00000486080 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
COL9A1-207ENST00000486080 NFKBIEO00221 500 aa17.15■□□□□ 0.34
COL9A1-207ENST00000486080 BLOC1S2Q6QNY1 142 aa17.15■□□□□ 0.34
COL9A1-207ENST00000486080 SH3RF3Q8TEJ3 882 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-207ENST00000486080 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
COL9A1-207ENST00000486080 PDRG1Q9NUG6 133 aa17.15■□□□□ 0.34
COL9A1-207ENST00000486080 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
COL9A1-207ENST00000486080 RPS6KB1P23443 525 aa17.14■□□□□ 0.34
COL9A1-207ENST00000486080 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.34
COL9A1-207ENST00000486080 BTDP43251 543 aa17.14■□□□□ 0.34
COL9A1-207ENST00000486080 SCNN1DP51172 638 aa17.14■□□□□ 0.34
COL9A1-207ENST00000486080 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.34
COL9A1-207ENST00000486080 CRNKL1Q9BZJ0 848 aaKnown RBP17.14■□□□□ 0.34
COL9A1-207ENST00000486080 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.34
COL9A1-207ENST00000486080 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.33
COL9A1-207ENST00000486080 AK2P54819 239 aa17.14■□□□□ 0.33
COL9A1-207ENST00000486080 PPP4CP60510 307 aa17.14■□□□□ 0.33
COL9A1-207ENST00000486080 TBC1D10CQ8IV04 446 aa17.14■□□□□ 0.33
COL9A1-207ENST00000486080 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
COL9A1-207ENST00000486080 DAGLAQ9Y4D2 1042 aa17.14■□□□□ 0.33
COL9A1-207ENST00000486080 GAKO14976 1311 aa17.14■□□□□ 0.33
COL9A1-207ENST00000486080 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
COL9A1-207ENST00000486080 BAG3O95817 575 aa17.13■□□□□ 0.33
COL9A1-207ENST00000486080 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
COL9A1-207ENST00000486080 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
COL9A1-207ENST00000486080 SLF2Q8IX21 1173 aa17.13■□□□□ 0.33
COL9A1-207ENST00000486080 NOL10Q9BSC4 688 aaKnown RBP17.13■□□□□ 0.33
COL9A1-207ENST00000486080 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
COL9A1-207ENST00000486080 RAD17O75943 681 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 FKBP1AP62942 108 aaKnown RBP17.12■□□□□ 0.33
COL9A1-207ENST00000486080 NKX2-3Q8TAU0 364 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
COL9A1-207ENST00000486080 INCENPQ9NQS7 918 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 TACC3Q9Y6A5 838 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 RASSF7Q02833 373 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
COL9A1-207ENST00000486080 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 MCM2P49736 904 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 PRELPP51888 382 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 CTR9Q6PD62 1173 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 ATP8A2Q9NTI2 1148 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
COL9A1-207ENST00000486080 PSMD14O00487 310 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 RHBDL3P58872 404 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 EVX2Q03828 476 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 PPARAQ07869 468 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 DHX32Q7L7V1 743 aaKnown RBP17.1■□□□□ 0.33
COL9A1-207ENST00000486080 CHST3Q7LGC8 479 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-207ENST00000486080 LAMB1P07942 1786 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 NEDD4P46934 1319 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 USP17L21D6R901 530 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
COL9A1-207ENST00000486080 USP5P45974 858 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 EXOSC10Q01780 885 aaKnown RBP17.1■□□□□ 0.33
COL9A1-207ENST00000486080 TOB2Q14106 344 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-207ENST00000486080 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
COL9A1-207ENST00000486080 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
COL9A1-207ENST00000486080 FOCADQ5VW36 1801 aa17.09■□□□□ 0.33
COL9A1-207ENST00000486080 VIL1P09327 827 aaKnown RBP17.09■□□□□ 0.33
COL9A1-207ENST00000486080 CYP2D6P10635 497 aa17.09■□□□□ 0.33
COL9A1-207ENST00000486080 CRKP46108 304 aa17.09■□□□□ 0.33
COL9A1-207ENST00000486080 HHIPL2Q6UWX4 724 aa17.09■□□□□ 0.33
COL9A1-207ENST00000486080 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-207ENST00000486080 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
COL9A1-207ENST00000486080 NCOA7Q8NI08 942 aa17.09■□□□□ 0.33
COL9A1-207ENST00000486080 SYT17Q9BSW7 474 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms