RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 CCDC39Q9UFE4 941 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 RAB3GAP2Q9H2M9 1393 aa5.36□□□□□ -1.55
PRPF38B-205ENST00000485810 FANCD2Q9BXW9 1451 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 PDE2AO00408 941 aaPredicted RBP5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 SMARCA5O60264 1052 aaPredicted RBP5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 PRNPP04156 253 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 CES1P23141 567 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 MZF1P28698 734 aaPredicted RBP5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 ADMP35318 185 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 OGFOD2Q6N063 350 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 VN1R5Q7Z5H4 357 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 FBXL6Q8N531 539 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 SLC7A3Q8WY07 619 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 MYH16Q9H6N6 1097 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 CCDC87Q9NVE4 849 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 PHLDB1Q86UU1 1377 aa5.35□□□□□ -1.55
PRPF38B-205ENST00000485810 SERPINB4P48594 390 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 C19orf57Q0VDD7 668 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 CDPF1Q6NVV7 123 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 FDX2Q6P4F2 183 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 SMG8Q8ND04 991 aaKnown RBP5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 GATA6Q92908 595 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 NXPE3Q969Y0 559 aa5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 FOXD3Q9UJU5 478 aaPredicted RBP5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 POLA1P09884 1462 aaPredicted RBP5.34□□□□□ -1.55
PRPF38B-205ENST00000485810 THOC2Q8NI27 1593 aaKnown RBP5.34□□□□□ -1.56
PRPF38B-205ENST00000485810 FMN1Q68DA7 1419 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 TOPBP1Q92547 1522 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 LOC102724159A0A0B4J2E5 919 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 LOC100289279A0A1B0GTE1 492 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 HMGB1P1B2RPK0 211 aaPredicted RBP5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 FZD6O60353 706 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 DRD2P14416 443 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 FOSL1P15407 271 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 PCSK2P16519 638 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 MCCP23508 829 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 FKBP4Q02790 459 aaKnown RBP eCLIP5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 KCNA1Q09470 495 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 PWP2Q15269 919 aaKnown RBP5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 TMEM102Q8N9M5 508 aaPredicted RBP5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 SUGCTQ9HAC7 445 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 LEMD3Q9Y2U8 911 aa5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 PCF11O94913 1555 aaKnown RBP5.33□□□□□ -1.56
PRPF38B-205ENST00000485810 EREGO14944 169 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 ITGB5P18084 799 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 CABP4P57796 275 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 GPATCH11Q8N954 259 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 C2CD4AQ8NCU7 369 aaPredicted RBP5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 FBLIM1Q8WUP2 373 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 RIPOR2Q9Y4F9 1068 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 SNAPC4Q5SXM2 1469 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 LAMC3Q9Y6N6 1575 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 WDR97A6NE52 1622 aa5.32□□□□□ -1.56
PRPF38B-205ENST00000485810 SAMD9Q5K651 1589 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 ANKRD62A6NC57 917 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 GAS2O43903 313 aaKnown RBP5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 TNFRSF21O75509 655 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 FAM13AO94988 1023 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 POLR3DP05423 398 aaPredicted RBP5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 NEFMP07197 916 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 NPR3P17342 541 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 GORABQ5T7V8 394 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 ALKBH2Q6NS38 261 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 C12orf50Q8NA57 414 aaPredicted RBP5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 DRC1Q96MC2 740 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 DNAJC2Q99543 621 aaKnown RBP5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 ZKSCAN3Q9BRR0 538 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 NRSN2Q9GZP1 204 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 PRDM10Q9NQV6 1147 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 LATS2Q9NRM7 1088 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 ATG3Q9NT62 314 aa5.31□□□□□ -1.56
PRPF38B-205ENST00000485810 PHACTR2O75167 634 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 RPLP1P05386 114 aaKnown RBP5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 C8AP07357 584 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 NUTM2GQ5VZR2 741 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 ZAR1Q86SH2 424 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 WFDC3Q8IUB2 231 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 BSNDQ8WZ55 320 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 OSMRQ99650 979 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 OSBPL1AQ9BXW6 950 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 PRKAG2Q9UGJ0 569 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 ABCA5Q8WWZ7 1642 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 ARHGEF11O15085 1522 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 HFM1A2PYH4 1435 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 FGD6Q6ZV73 1430 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 CTTNBP2Q8WZ74 1663 aa5.3□□□□□ -1.56
PRPF38B-205ENST00000485810 FAM95CA0A1B0GW59 222 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 FAM170BA6NMN3 283 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 H3BRB1 525 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 MARCH6O60337 910 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 PTMAP06454 111 aaKnown RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 CTSBP07858 339 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 ESRRAP11474 423 aaPredicted RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 RXRBP28702 533 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 SF3B2Q13435 895 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms