RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 DEKP35659 375 aaKnown RBP5.8□□□□□ -1.48
RTN4-213ENST00000485749 FOXD4Q12950 439 aaPredicted RBP5.8□□□□□ -1.48
RTN4-213ENST00000485749 GRIK5Q16478 980 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 C8orf34Q49A92 452 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 RINLQ6ZS11 566 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 CCAR1Q8IX12 1150 aaKnown RBP5.8□□□□□ -1.48
RTN4-213ENST00000485749 CKAP2LQ8IYA6 745 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 NLGN1Q8N2Q7 840 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 TMEM130Q8N3G9 435 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 GPR152Q8TDT2 470 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 CCDC74AQ96AQ1 378 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 GPRASP2Q96D09 838 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 SPACA7Q96KW9 195 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 TLR7Q9NYK1 1049 aaKnown RBP5.8□□□□□ -1.48
RTN4-213ENST00000485749 FNDC3AQ9Y2H6 1198 aaKnown RBP5.8□□□□□ -1.48
RTN4-213ENST00000485749 CCER2I3L3R5 266 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 DLL1O00548 723 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 EGFRP00533 1210 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
RTN4-213ENST00000485749 TARSP26639 723 aaKnown RBP5.79□□□□□ -1.48
RTN4-213ENST00000485749 SOX18P35713 384 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 PAK2Q13177 524 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 MYBPC2Q14324 1141 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 TSHZ1Q6ZSZ6 1077 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 ZNF622Q969S3 477 aaKnown RBP eCLIP5.79□□□□□ -1.48
RTN4-213ENST00000485749 MRFAP1L1Q96HT8 127 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 NOC4LQ9BVI4 516 aaKnown RBP5.79□□□□□ -1.48
RTN4-213ENST00000485749 OSBPL7Q9BZF2 842 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 KLHL42Q9P2K6 505 aa5.79□□□□□ -1.48
RTN4-213ENST00000485749 NRDCO43847 1150 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 XYLBO75191 536 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 TNFRSF21O75509 655 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 SASH3O75995 380 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 TXKP42681 527 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 PWP1Q13610 501 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 PDE12Q6L8Q7 609 aaKnown RBP5.78□□□□□ -1.48
RTN4-213ENST00000485749 CASC1Q6TDU7 716 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 DZIP1LQ8IYY4 767 aaKnown RBP5.78□□□□□ -1.48
RTN4-213ENST00000485749 ZCRB1Q8TBF4 217 aaKnown RBP5.78□□□□□ -1.48
RTN4-213ENST00000485749 SNX29Q8TEQ0 813 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 KCNB2Q92953 911 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 MEGF10Q96KG7 1140 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 RSRP1Q9BUV0 290 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 ZFYVE28Q9HCC9 887 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 ZFATQ9P243 1243 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 PNMA2Q9UL42 364 aa5.78□□□□□ -1.48
RTN4-213ENST00000485749 LOC102724428A0A0B4J2F2 783 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 CCDC194A0A1B0GVG4 234 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 FAM177BA6PVY3 158 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 ZBTB42B2RXF5 422 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 PPFIA4O75335 1185 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 FSTP19883 344 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 SIK1P57059 783 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 MLLT1Q03111 559 aaPredicted RBP5.77□□□□□ -1.49
RTN4-213ENST00000485749 SERINC3Q13530 473 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 PTPROQ16827 1216 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 MCTP1Q6DN14 999 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 LRP10Q7Z4F1 713 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 KRTAP1-3Q8IUG1 177 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 CEP41Q9BYV8 373 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 GOLGA2P5Q9HBQ8 144 aa5.77□□□□□ -1.49
RTN4-213ENST00000485749 RTCBQ9Y3I0 505 aaKnown RBP5.77□□□□□ -1.49
RTN4-213ENST00000485749 ENPP3O14638 875 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 ZRANB2O95218 330 aaKnown RBP eCLIP5.76□□□□□ -1.49
RTN4-213ENST00000485749 HSP90AA1P07900 732 aaKnown RBP5.76□□□□□ -1.49
RTN4-213ENST00000485749 USP17L7P0C7H9 530 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 HOXD8P13378 290 aaPredicted RBP5.76□□□□□ -1.49
RTN4-213ENST00000485749 PAX3P23760 479 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 COL9A2Q14055 689 aaPredicted RBP5.76□□□□□ -1.49
RTN4-213ENST00000485749 TCEAL1Q15170 157 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 RNF187Q5TA31 235 aaPredicted RBP5.76□□□□□ -1.49
RTN4-213ENST00000485749 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 MEI1Q5TIA1 1274 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 JAZF1Q86VZ6 243 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 CMTR1Q8N1G2 835 aaKnown RBP5.76□□□□□ -1.49
RTN4-213ENST00000485749 ANKRD24Q8TF21 1146 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 JADE2Q9NQC1 790 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 SIRPGQ9P1W8 387 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 STRIP2Q9ULQ0 834 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 COMMD10Q9Y6G5 202 aa5.76□□□□□ -1.49
RTN4-213ENST00000485749 F8W735 103 aaPredicted RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 DEAF1O75398 565 aaPredicted RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 WDHD1O75717 1129 aaPredicted RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 PARNO95453 639 aaKnown RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 RLBP1P12271 317 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 GLB1P16278 677 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 GRIK1P39086 918 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 IRAK1P51617 712 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 BMS1Q14692 1282 aaKnown RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 UVSSAQ2YD98 709 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 GDF6Q6KF10 455 aaPredicted RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 HFE2Q6ZVN8 426 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 IL22RA1Q8N6P7 574 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 EPS8L3Q8TE67 593 aaKnown RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 PNISRQ8TF01 805 aaKnown RBP5.75□□□□□ -1.49
RTN4-213ENST00000485749 PMM1Q92871 262 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 PMEPA1Q969W9 287 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 PPP4R2Q9NY27 417 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 KCNG1Q9UIX4 513 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms