RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MYH2Q9UKX2 1941 aa21.13■□□□□ 0.97
CHMP3-207ENST00000485465 SPDYE2BA6NHP3 402 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 GPAA1O43292 621 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 SPDYE6P0CI01 402 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 C8orf34Q49A92 452 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 CCDC129Q6ZRS4 1044 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 SAMD7Q7Z3H4 446 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 ZNF589Q86UQ0 364 aaPredicted RBP21.12■□□□□ 0.97
CHMP3-207ENST00000485465 CERS3Q8IU89 383 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 LCORLQ8N3X6 602 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 ZBED3Q96IU2 234 aaPredicted RBP21.12■□□□□ 0.97
CHMP3-207ENST00000485465 PRMT6Q96LA8 375 aaPredicted RBP21.12■□□□□ 0.97
CHMP3-207ENST00000485465 STRBPQ96SI9 672 aaKnown RBP21.12■□□□□ 0.97
CHMP3-207ENST00000485465 ARMT1Q9H993 441 aa21.12■□□□□ 0.97
CHMP3-207ENST00000485465 CCDC171Q6TFL3 1326 aa21.11■□□□□ 0.97
CHMP3-207ENST00000485465 ADAMTSL1Q8N6G6 1762 aa21.11■□□□□ 0.97
CHMP3-207ENST00000485465 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
CHMP3-207ENST00000485465 RBM26Q5T8P6 1007 aaKnown RBP21.11■□□□□ 0.97
CHMP3-207ENST00000485465 EGFRP00533 1210 aa21.1■□□□□ 0.97
CHMP3-207ENST00000485465 PLCG2P16885 1265 aa21.1■□□□□ 0.97
CHMP3-207ENST00000485465 RHBDL3P58872 404 aa21.1■□□□□ 0.97
CHMP3-207ENST00000485465 KIF4BQ2VIQ3 1234 aa21.1■□□□□ 0.97
CHMP3-207ENST00000485465 TBC1D10BQ4KMP7 808 aaPredicted RBP21.1■□□□□ 0.97
CHMP3-207ENST00000485465 SH3RF3Q8TEJ3 882 aaPredicted RBP21.1■□□□□ 0.97
CHMP3-207ENST00000485465 ADARB2Q9NS39 739 aaKnown RBP21.1■□□□□ 0.97
CHMP3-207ENST00000485465 USP40Q9NVE5 1235 aa21.1■□□□□ 0.97
CHMP3-207ENST00000485465 HACL1Q9UJ83 578 aa21.1■□□□□ 0.97
CHMP3-207ENST00000485465 WNT10BO00744 389 aa21.09■□□□□ 0.97
CHMP3-207ENST00000485465 CDC42EP5Q6NZY7 148 aa21.09■□□□□ 0.97
CHMP3-207ENST00000485465 IQCA1LA6NCM1 817 aa21.08■□□□□ 0.97
CHMP3-207ENST00000485465 POTECB2RU33 542 aa21.08■□□□□ 0.97
CHMP3-207ENST00000485465 GNAT2P19087 354 aa21.08■□□□□ 0.97
CHMP3-207ENST00000485465 NBPF9Q3BBW0 867 aa21.08■□□□□ 0.97
CHMP3-207ENST00000485465 TRPM4Q8TD43 1214 aa21.08■□□□□ 0.97
CHMP3-207ENST00000485465 WDR90Q96KV7 1748 aa21.08■□□□□ 0.97
CHMP3-207ENST00000485465 CRNKL1Q9BZJ0 848 aaKnown RBP21.08■□□□□ 0.97
CHMP3-207ENST00000485465 TDRD3Q9H7E2 651 aaKnown RBP21.08■□□□□ 0.97
CHMP3-207ENST00000485465 TEX11Q8IYF3 940 aa21.07■□□□□ 0.96
CHMP3-207ENST00000485465 SLC4A4Q9Y6R1 1079 aa21.07■□□□□ 0.96
CHMP3-207ENST00000485465 PATL2C9JE40 543 aaKnown RBP21.06■□□□□ 0.96
CHMP3-207ENST00000485465 PRKAB2O43741 272 aa21.06■□□□□ 0.96
CHMP3-207ENST00000485465 MYO1BO43795 1136 aa21.06■□□□□ 0.96
CHMP3-207ENST00000485465 EPHX2P34913 555 aa21.06■□□□□ 0.96
CHMP3-207ENST00000485465 HIRAP54198 1017 aaPredicted RBP21.06■□□□□ 0.96
CHMP3-207ENST00000485465 SPDYE2Q495Y8 402 aa21.06■□□□□ 0.96
CHMP3-207ENST00000485465 VPS53Q5VIR6 699 aa21.06■□□□□ 0.96
CHMP3-207ENST00000485465 ZNF70Q9UC06 446 aaPredicted RBP21.06■□□□□ 0.96
CHMP3-207ENST00000485465 EIF5BO60841 1220 aaKnown RBP21.05■□□□□ 0.96
CHMP3-207ENST00000485465 WDHD1O75717 1129 aaPredicted RBP21.05■□□□□ 0.96
CHMP3-207ENST00000485465 HSPD1P10809 573 aaKnown RBP21.05■□□□□ 0.96
CHMP3-207ENST00000485465 KIAA1211Q6ZU35 1233 aa21.05■□□□□ 0.96
CHMP3-207ENST00000485465 USP50Q70EL3 339 aaPredicted RBP21.05■□□□□ 0.96
CHMP3-207ENST00000485465 TAF1DQ9H5J8 278 aaPredicted RBP21.05■□□□□ 0.96
CHMP3-207ENST00000485465 CLRN2A0PK11 232 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 GSG1L2A8MUP6 293 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 FOXP2O15409 715 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 REC8O95072 547 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 USP5P45974 858 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 PTH1RQ03431 593 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 TGFBRAP1Q8WUH2 860 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 SDR42E1Q8WUS8 393 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 DSCC1Q9BVC3 393 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 IDI2Q9BXS1 227 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 LSG1Q9H089 658 aaKnown RBP21.04■□□□□ 0.96
CHMP3-207ENST00000485465 RRAGCQ9HB90 399 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 ANO2Q9NQ90 1003 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 TMOD2Q9NZR1 351 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 RPAP1Q9BWH6 1393 aaPredicted RBP21.04■□□□□ 0.96
CHMP3-207ENST00000485465 SCN4AP35499 1836 aa21.04■□□□□ 0.96
CHMP3-207ENST00000485465 SEC24BO95487 1268 aa21.03■□□□□ 0.96
CHMP3-207ENST00000485465 APPP05067 770 aa21.03■□□□□ 0.96
CHMP3-207ENST00000485465 VEGFAP15692 232 aaPredicted RBP21.03■□□□□ 0.96
CHMP3-207ENST00000485465 CACNB3P54284 484 aa21.03■□□□□ 0.96
CHMP3-207ENST00000485465 BACH2Q9BYV9 841 aa21.03■□□□□ 0.96
CHMP3-207ENST00000485465 ATP8A2Q9NTI2 1148 aa21.03■□□□□ 0.96
CHMP3-207ENST00000485465 ASTN2O75129 1339 aaPredicted RBP21.03■□□□□ 0.96
CHMP3-207ENST00000485465 NFIAQ12857 509 aa21.02■□□□□ 0.96
CHMP3-207ENST00000485465 GIMAP6Q6P9H5 292 aa21.02■□□□□ 0.96
CHMP3-207ENST00000485465 MAPKAPK5Q8IW41 473 aa21.02■□□□□ 0.96
CHMP3-207ENST00000485465 IFNL3Q8IZI9 196 aa21.02■□□□□ 0.96
CHMP3-207ENST00000485465 ZNF526Q8TF50 670 aaPredicted RBP21.02■□□□□ 0.96
CHMP3-207ENST00000485465 NACAP1Q9BZK3 213 aa21.02■□□□□ 0.96
CHMP3-207ENST00000485465 VEZTQ9HBM0 779 aa21.02■□□□□ 0.96
CHMP3-207ENST00000485465 DCP1AQ9NPI6 582 aaPredicted RBP21.02■□□□□ 0.96
CHMP3-207ENST00000485465 DDX4Q9NQI0 724 aaKnown RBP21.02■□□□□ 0.96
CHMP3-207ENST00000485465 MKRN1Q9UHC7 482 aaKnown RBP21.02■□□□□ 0.96
CHMP3-207ENST00000485465 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
CHMP3-207ENST00000485465 PICALMQ13492 652 aa21.01■□□□□ 0.95
CHMP3-207ENST00000485465 ALX1Q15699 326 aa21.01■□□□□ 0.95
CHMP3-207ENST00000485465 FKBP1CQ5VVH2 108 aa21.01■□□□□ 0.95
CHMP3-207ENST00000485465 PNMA8AQ86V59 439 aaPredicted RBP21.01■□□□□ 0.95
CHMP3-207ENST00000485465 MAP4K1Q92918 833 aa21.01■□□□□ 0.95
CHMP3-207ENST00000485465 EPB41L4AQ9HCS5 686 aaPredicted RBP21.01■□□□□ 0.95
CHMP3-207ENST00000485465 FAM198AQ9UFP1 575 aa21.01■□□□□ 0.95
CHMP3-207ENST00000485465 FLT1P17948 1338 aa21.01■□□□□ 0.95
CHMP3-207ENST00000485465 TCP10L2B9ZVM9 353 aa21■□□□□ 0.95
CHMP3-207ENST00000485465 ANGEL2Q5VTE6 544 aaKnown RBP21■□□□□ 0.95
CHMP3-207ENST00000485465 DDRGK1Q96HY6 314 aa21■□□□□ 0.95
CHMP3-207ENST00000485465 NMRK2Q9NPI5 230 aa21■□□□□ 0.95
CHMP3-207ENST00000485465 ENTPD3O75355 529 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms