RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
SRRM1-213ENST00000485441 FAM177BA6PVY3 158 aa7.96□□□□□ -1.14
SRRM1-213ENST00000485441 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
SRRM1-213ENST00000485441 CTSBP07858 339 aa7.96□□□□□ -1.14
SRRM1-213ENST00000485441 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
SRRM1-213ENST00000485441 SLC7A3Q8WY07 619 aa7.96□□□□□ -1.14
SRRM1-213ENST00000485441 CBX8Q9HC52 389 aa7.96□□□□□ -1.14
SRRM1-213ENST00000485441 TLR3O15455 904 aaKnown RBP7.95□□□□□ -1.14
SRRM1-213ENST00000485441 CYP11A1P05108 521 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 ARL4DP49703 201 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 SEZ6Q53EL9 994 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
SRRM1-213ENST00000485441 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.95□□□□□ -1.14
SRRM1-213ENST00000485441 REC114Q7Z4M0 266 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 REXO1Q8N1G1 1221 aaKnown RBP7.95□□□□□ -1.14
SRRM1-213ENST00000485441 KLHL23Q8NBE8 558 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 STRIP2Q9ULQ0 834 aa7.95□□□□□ -1.14
SRRM1-213ENST00000485441 GFRA2O00451 464 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 DEAF1O75398 565 aaPredicted RBP7.94□□□□□ -1.14
SRRM1-213ENST00000485441 ETFBP38117 255 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 DGKGP49619 791 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 RPL6Q02878 288 aaKnown RBP7.94□□□□□ -1.14
SRRM1-213ENST00000485441 POU4F3Q15319 338 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
SRRM1-213ENST00000485441 FAM117BQ6P1L5 589 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 DMRTC2Q8IXT2 367 aaPredicted RBP7.94□□□□□ -1.14
SRRM1-213ENST00000485441 GPBAR1Q8TDU6 330 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 HIRIP3Q9BW71 556 aaPredicted RBP7.94□□□□□ -1.14
SRRM1-213ENST00000485441 CARD10Q9BWT7 1032 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 CCDC86Q9H6F5 360 aaKnown RBP7.94□□□□□ -1.14
SRRM1-213ENST00000485441 ZNF408Q9H9D4 720 aa7.94□□□□□ -1.14
SRRM1-213ENST00000485441 ZNF862O60290 1169 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 ADAM11O75078 769 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 MAOBP27338 520 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 CDK8P49336 464 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 SUZ12Q15022 739 aaKnown RBP7.93□□□□□ -1.14
SRRM1-213ENST00000485441 KCNB2Q92953 911 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 SHDQ96IW2 340 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 BRMS1Q9HCU9 246 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 KCNK4Q9NYG8 393 aa7.93□□□□□ -1.14
SRRM1-213ENST00000485441 POLR3KQ9Y2Y1 108 aaPredicted RBP7.93□□□□□ -1.14
SRRM1-213ENST00000485441 DDX3YO15523 660 aaKnown RBP7.92□□□□□ -1.14
SRRM1-213ENST00000485441 KLF4O43474 513 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 STK10O94804 968 aaKnown RBP7.92□□□□□ -1.14
SRRM1-213ENST00000485441 ATE1O95260 518 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 DLGAP3O95886 979 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 LMNB1P20700 586 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 CLCQ05315 142 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 CWF19L2Q2TBE0 894 aaKnown RBP7.92□□□□□ -1.14
SRRM1-213ENST00000485441 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
SRRM1-213ENST00000485441 ZC3H12CQ9C0D7 883 aaKnown RBP7.92□□□□□ -1.14
SRRM1-213ENST00000485441 PPT2Q9UMR5 302 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 PRR36Q9H6K5 1346 aa7.92□□□□□ -1.14
SRRM1-213ENST00000485441 WFS1O76024 890 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 SSBP05455 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
SRRM1-213ENST00000485441 GIPRP48546 466 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 ZNF165P49910 485 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 INPP5AQ14642 412 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 KIF4BQ2VIQ3 1234 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 CCDC144BQ3MJ40 725 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 FOXD4L6Q3SYB3 417 aaPredicted RBP7.91□□□□□ -1.14
SRRM1-213ENST00000485441 ZNF385CQ66K41 422 aaPredicted RBP7.91□□□□□ -1.14
SRRM1-213ENST00000485441 FOXD4L3Q6VB84 417 aaPredicted RBP7.91□□□□□ -1.14
SRRM1-213ENST00000485441 LINC00114Q6XXX2 140 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 DTWD1Q8N5C7 304 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 RBBP8NLQ8NC74 664 aaPredicted RBP7.91□□□□□ -1.14
SRRM1-213ENST00000485441 SRRTQ9BXP5 876 aaKnown RBP7.91□□□□□ -1.14
SRRM1-213ENST00000485441 PCDHGC5Q9Y5F6 944 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 MRVI1Q9Y6F6 885 aa7.91□□□□□ -1.14
SRRM1-213ENST00000485441 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 LOC100289279A0A1B0GTE1 492 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 ARHGEF15O94989 841 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 SERINC3Q13530 473 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 NBPF6Q5VWK0 638 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 ZNF775Q96BV0 537 aaPredicted RBP7.9□□□□□ -1.14
SRRM1-213ENST00000485441 TRIM11Q96F44 468 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 NBPF4Q96M43 638 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 ZNRF3Q9ULT6 936 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 SNCAIPQ9Y6H5 919 aa7.9□□□□□ -1.14
SRRM1-213ENST00000485441 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 DLL1O00548 723 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 LIG1P18858 919 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 CD68P34810 354 aaPredicted RBP7.89□□□□□ -1.15
SRRM1-213ENST00000485441 RING1Q06587 406 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 FAM169BQ8N8A8 192 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 PCDHA4Q9UN74 947 aa7.89□□□□□ -1.15
SRRM1-213ENST00000485441 AMPD1P23109 780 aa7.88□□□□□ -1.15
SRRM1-213ENST00000485441 MCM4P33991 863 aa7.88□□□□□ -1.15
SRRM1-213ENST00000485441 NLRP12P59046 1061 aa7.88□□□□□ -1.15
SRRM1-213ENST00000485441 ZC3H12AQ5D1E8 599 aaKnown RBP7.88□□□□□ -1.15
SRRM1-213ENST00000485441 LRFN4Q6PJG9 635 aa7.88□□□□□ -1.15
SRRM1-213ENST00000485441 TREML4Q6UXN2 200 aa7.88□□□□□ -1.15
SRRM1-213ENST00000485441 CCDC81Q6ZN84 652 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms