RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 C11orf91Q3C1V1 193 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 NUTM2GQ5VZR2 741 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 MICAL1Q8TDZ2 1067 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 COG3Q96JB2 828 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 PDGFDQ9GZP0 370 aaPredicted RBP7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 ATP13A2Q9NQ11 1180 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 PRDM11Q9NQV5 511 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 PHRF1Q9P1Y6 1649 aaKnown RBP7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 COL14A1Q05707 1796 aaKnown RBP7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 OVOS2A0A0J9YW53 1432 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 OVOS2Q6IE36 1432 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 CCDC7Q96M83 1385 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 SERTM1A2A2V5 107 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 OPLAHO14841 1288 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 GNRH1P01148 92 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 FGRP09769 529 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 ARHGEF25Q86VW2 580 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 JAZF1Q86VZ6 243 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 NME9Q86XW9 330 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 JMYQ8N9B5 988 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 GPATCH3Q96I76 525 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 PANK3Q9H999 370 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 RAB6BQ9NRW1 208 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 DMGDHQ9UI17 866 aaKnown RBP7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 ABCC6O95255 1503 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 THSD7AQ9UPZ6 1657 aa7.35□□□□□ -1.23
NHLRC3-205ENST00000485407 NSD2O96028 1365 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 KIAA0232Q92628 1395 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 WASHC2AQ641Q2 1341 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 VARSP26640 1264 aaKnown RBP7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 DHX9Q08211 1270 aaKnown RBP7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 PAK2Q13177 524 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 MTFR1Q15390 333 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 CKAP2LQ8IYA6 745 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 GPR152Q8TDT2 470 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 DNAJC25Q9H1X3 360 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 NEUROD4Q9HD90 331 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 BTG4Q9NY30 223 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 KLK14Q9P0G3 267 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 HCN4Q9Y3Q4 1203 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 KNSTRNQ9Y448 316 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 MRPL42Q9Y6G3 142 aaKnown RBP7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 NSD3Q9BZ95 1437 aa7.34□□□□□ -1.23
NHLRC3-205ENST00000485407 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 CDK2AP1O14519 115 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 CPNE3O75131 537 aaKnown RBP7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 ATF4P18848 351 aaPredicted RBP7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 FSHRP23945 695 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 TLR1Q15399 786 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 RNF187Q5TA31 235 aaPredicted RBP7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 GPRASP2Q96D09 838 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 C12orf49Q9H741 205 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 TLL2Q9Y6L7 1015 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 KIF20BQ96Q89 1820 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 NPC1L1Q9UHC9 1359 aa7.33□□□□□ -1.24
NHLRC3-205ENST00000485407 NFAT5O94916 1531 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 SPATA31A5Q5VU36 1347 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 SPATA31A7Q8IWB4 1347 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 K7ELQ4 463 aaPredicted RBP7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 HSD3B2P26439 372 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 GJA8P48165 433 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 EVA1CP58658 441 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 ANAPC15P60006 121 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 TAF1CQ15572 869 aaPredicted RBP7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 RTN1Q16799 776 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 KCNB2Q92953 911 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 ARHGEF10LQ9HCE6 1279 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 USP3Q9Y6I4 520 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 LMO7Q8WWI1 1683 aa7.32□□□□□ -1.24
NHLRC3-205ENST00000485407 COL18A1P39060 1754 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 A6NHS1 94 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 EML1O00423 815 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 GIPC1O14908 333 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 GRIN3BO60391 1043 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 SSBP05455 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 CHRNA2Q15822 529 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 NRAPQ86VF7 1730 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 NBPF15Q8N660 670 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 ZCRB1Q8TBF4 217 aaKnown RBP7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 IP6K1Q92551 441 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 KLRG1Q96E93 195 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 THRAP3Q9Y2W1 955 aaKnown RBP7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 RTL1A6NKG5 1358 aa7.31□□□□□ -1.24
NHLRC3-205ENST00000485407 ANKRD26Q9UPS8 1709 aa7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 MAP2P11137 1827 aaKnown RBP7.3□□□□□ -1.24
NHLRC3-205ENST00000485407 RPLP1P05386 114 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms