RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TEPSINQ96N21 525 aa21.67■■□□□ 1.06
SREBF1-213ENST00000485080 PAPPA2Q9BXP8 1791 aa21.66■■□□□ 1.06
SREBF1-213ENST00000485080 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
SREBF1-213ENST00000485080 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
SREBF1-213ENST00000485080 JMYQ8N9B5 988 aa21.66■■□□□ 1.06
SREBF1-213ENST00000485080 HAUS7Q99871 368 aa21.66■■□□□ 1.06
SREBF1-213ENST00000485080 IDI2Q9BXS1 227 aa21.66■■□□□ 1.06
SREBF1-213ENST00000485080 ECHDC1Q9NTX5 307 aa21.66■■□□□ 1.06
SREBF1-213ENST00000485080 RPAP1Q9BWH6 1393 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-213ENST00000485080 TCP10L2B9ZVM9 353 aa21.65■■□□□ 1.06
SREBF1-213ENST00000485080 PPP4CP60510 307 aa21.65■■□□□ 1.06
SREBF1-213ENST00000485080 NAA16Q6N069 864 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-213ENST00000485080 USP40Q9NVE5 1235 aa21.65■■□□□ 1.06
SREBF1-213ENST00000485080 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
SREBF1-213ENST00000485080 RFX7Q2KHR2 1363 aa21.64■■□□□ 1.06
SREBF1-213ENST00000485080 UNCXA6NJT0 531 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 BTDP43251 543 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 HUNKP57058 714 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 RHBDL3P58872 404 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 MAP3K12Q12852 859 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 MAP3K11Q16584 847 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 FAM151AQ8WW52 585 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 GPATCH3Q96I76 525 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 MKRN1Q9UHC7 482 aaKnown RBP21.64■■□□□ 1.05
SREBF1-213ENST00000485080 DOCK2Q92608 1830 aa21.64■■□□□ 1.05
SREBF1-213ENST00000485080 TTC41PQ6P2S7 1318 aa21.63■■□□□ 1.05
SREBF1-213ENST00000485080 MYO5AQ9Y4I1 1855 aaKnown RBP21.63■■□□□ 1.05
SREBF1-213ENST00000485080 SSC5DA1L4H1 1573 aa21.63■■□□□ 1.05
SREBF1-213ENST00000485080 ECE1P42892 770 aa21.63■■□□□ 1.05
SREBF1-213ENST00000485080 CACNB3P54284 484 aa21.63■■□□□ 1.05
SREBF1-213ENST00000485080 NBPF12Q5TAG4 269 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-213ENST00000485080 NDUFB9Q9Y6M9 179 aa21.63■■□□□ 1.05
SREBF1-213ENST00000485080 PPP1R12BO60237 982 aaPredicted RBP21.62■■□□□ 1.05
SREBF1-213ENST00000485080 ENTPD3O75355 529 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 IDH1O75874 414 aaKnown RBP21.62■■□□□ 1.05
SREBF1-213ENST00000485080 IGHDP01880 384 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 VEGFBP49765 207 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 CERS3Q8IU89 383 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 TMEM39BQ9GZU3 492 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 BOLA2Q9H3K6 86 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 PAG1Q9NWQ8 432 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 FAM198AQ9UFP1 575 aa21.62■■□□□ 1.05
SREBF1-213ENST00000485080 SALL3Q9BXA9 1300 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 WDHD1O75717 1129 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-213ENST00000485080 BAG3O95817 575 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 PLCG2P16885 1265 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 NFIAQ12857 509 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 LDLRAD1Q5T700 205 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 ARMC9Q7Z3E5 817 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 HOOK2Q96ED9 719 aa21.61■■□□□ 1.05
SREBF1-213ENST00000485080 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-213ENST00000485080 GOLIM4O00461 696 aa21.6■■□□□ 1.05
SREBF1-213ENST00000485080 RGMBQ6NW40 437 aa21.6■■□□□ 1.05
SREBF1-213ENST00000485080 CAPNS2Q96L46 248 aa21.6■■□□□ 1.05
SREBF1-213ENST00000485080 DNAJC2Q99543 621 aaKnown RBP21.6■■□□□ 1.05
SREBF1-213ENST00000485080 WDR33Q9C0J8 1336 aaKnown RBP21.59■■□□□ 1.05
SREBF1-213ENST00000485080 IRX6P78412 446 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-213ENST00000485080 ADGRA1Q86SQ6 560 aa21.59■■□□□ 1.05
SREBF1-213ENST00000485080 MAGEB6Q8N7X4 407 aa21.59■■□□□ 1.05
SREBF1-213ENST00000485080 CCDC102AQ96A19 550 aa21.59■■□□□ 1.05
SREBF1-213ENST00000485080 NOL10Q9BSC4 688 aaKnown RBP21.59■■□□□ 1.05
SREBF1-213ENST00000485080 BCL11AQ9H165 835 aa21.59■■□□□ 1.05
SREBF1-213ENST00000485080 STAP2Q9UGK3 403 aa21.59■■□□□ 1.05
SREBF1-213ENST00000485080 ERC2O15083 957 aa21.58■■□□□ 1.05
SREBF1-213ENST00000485080 USP2O75604 605 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-213ENST00000485080 CYP7A1P22680 504 aa21.58■■□□□ 1.05
SREBF1-213ENST00000485080 MAP2K2P36507 400 aa21.58■■□□□ 1.05
SREBF1-213ENST00000485080 RGS3P49796 1198 aa21.58■■□□□ 1.05
SREBF1-213ENST00000485080 CYP4F22Q6NT55 531 aa21.58■■□□□ 1.05
SREBF1-213ENST00000485080 CDAN1Q8IWY9 1227 aa21.58■■□□□ 1.05
SREBF1-213ENST00000485080 COL2A1P02458 1487 aaPredicted RBP21.58■■□□□ 1.04
SREBF1-213ENST00000485080 UBE2Q2LH0YL09 131 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 GLRX3O76003 335 aaKnown RBP21.57■■□□□ 1.04
SREBF1-213ENST00000485080 PDE6AP16499 860 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 MX1P20591 662 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 NUCB1Q02818 461 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 TTLL12Q14166 644 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-213ENST00000485080 SLC9C2Q5TAH2 1124 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 MOB2Q70IA6 237 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
SREBF1-213ENST00000485080 OTUD7AQ8TE49 926 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-213ENST00000485080 ANGEL1Q9UNK9 670 aaKnown RBP21.57■■□□□ 1.04
SREBF1-213ENST00000485080 THSD7BQ9C0I4 1608 aa21.56■■□□□ 1.04
SREBF1-213ENST00000485080 TCRBV5S4A2TA0A5A2 114 aa21.56■■□□□ 1.04
SREBF1-213ENST00000485080 FAM155AB1AL88 458 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-213ENST00000485080 IREB2P48200 963 aaKnown RBP21.56■■□□□ 1.04
SREBF1-213ENST00000485080 NOGQ13253 232 aa21.56■■□□□ 1.04
SREBF1-213ENST00000485080 EDC3Q96F86 508 aaKnown RBP21.56■■□□□ 1.04
SREBF1-213ENST00000485080 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.56■■□□□ 1.041e-7■■■■□ 22.6
SREBF1-213ENST00000485080 DDX4Q9NQI0 724 aaKnown RBP21.56■■□□□ 1.04
SREBF1-213ENST00000485080 AATFQ9NY61 560 aaKnown RBP eCLIP21.56■■□□□ 1.04
SREBF1-213ENST00000485080 ATRNL1Q5VV63 1379 aa21.56■■□□□ 1.04
SREBF1-213ENST00000485080 SLC10A3P09131 477 aa21.55■■□□□ 1.04
SREBF1-213ENST00000485080 ZNF157P51786 506 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-213ENST00000485080 MAP3K10Q02779 954 aa21.55■■□□□ 1.04
SREBF1-213ENST00000485080 TCP10Q12799 353 aa21.55■■□□□ 1.04
SREBF1-213ENST00000485080 DCAF15Q66K64 600 aa21.55■■□□□ 1.04
SREBF1-213ENST00000485080 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms