RNA–Protein interactions for RNA: ENST00000484910.1

RD3-202, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

TSL 1 (best)

Gene RD3, Length 3,070 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-202ENST00000484910 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
RD3-202ENST00000484910 SARM1Q6SZW1 724 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 MYL10Q9BUA6 226 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
RD3-202ENST00000484910 ALDH8A1Q9H2A2 487 aaPredicted RBP13.23□□□□□ -0.29
RD3-202ENST00000484910 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 TJP1Q07157 1748 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 ITGB4P16144 1822 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 FOXP2O15409 715 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 SLU7O95391 586 aaKnown RBP13.23□□□□□ -0.29
RD3-202ENST00000484910 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
RD3-202ENST00000484910 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 MAGEB6Q8N7X4 407 aa13.23□□□□□ -0.29
RD3-202ENST00000484910 CPLX1O14810 134 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 PRKAB2O43741 272 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 NRDCO43847 1150 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 HMGB1P09429 215 aaKnown RBP13.22□□□□□ -0.29
RD3-202ENST00000484910 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 NAA16Q6N069 864 aaPredicted RBP13.22□□□□□ -0.29
RD3-202ENST00000484910 SMARCC2Q8TAQ2 1214 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 LINC00116Q8NCU8 138 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 ZBTB9Q96C00 473 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 ZKSCAN3Q9BRR0 538 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 GPR108Q9NPR9 543 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
RD3-202ENST00000484910 DISP2A7MBM2 1401 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 GYG1P46976 350 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 SENP2Q9HC62 589 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 NUP188Q5SRE5 1749 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 ABCC6O95255 1503 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 MARCKSP29966 332 aaPredicted RBP13.21□□□□□ -0.29
RD3-202ENST00000484910 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
RD3-202ENST00000484910 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
RD3-202ENST00000484910 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
RD3-202ENST00000484910 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 RASGRF1Q13972 1273 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 SYCP1Q15431 976 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 IMMTQ16891 758 aaKnown RBP13.21□□□□□ -0.29
RD3-202ENST00000484910 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 ERO1AQ96HE7 468 aa13.21□□□□□ -0.29
RD3-202ENST00000484910 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.29
RD3-202ENST00000484910 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 ZNF213O14771 459 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 PRC1O43663 620 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 SLC3A2P08195 630 aaKnown RBP13.21□□□□□ -0.3
RD3-202ENST00000484910 GSDMDP57764 484 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 TPM4P67936 248 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.3
RD3-202ENST00000484910 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 TMX1Q9H3N1 280 aa13.21□□□□□ -0.3
RD3-202ENST00000484910 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 B4E1Z4 1266 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
RD3-202ENST00000484910 APPBP2Q92624 585 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 SLFN14P0C7P3 912 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 DSCC1Q9BVC3 393 aa13.2□□□□□ -0.3
RD3-202ENST00000484910 MBD4O95243 580 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 PDE6AP16499 860 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
RD3-202ENST00000484910 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 KIAA1468Q9P260 1216 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
RD3-202ENST00000484910 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 GNPATO15228 680 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 TOM1O60784 492 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 SERPINC1P01008 464 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 IGHMBP2P38935 993 aaKnown RBP13.19□□□□□ -0.3
RD3-202ENST00000484910 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
RD3-202ENST00000484910 VGLL2Q8N8G2 317 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 LRP2BPQ9P2M1 347 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 SPTLC2O15270 562 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 CHRNDQ07001 517 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
RD3-202ENST00000484910 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
RD3-202ENST00000484910 MICU3Q86XE3 530 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
RD3-202ENST00000484910 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms