RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 RAD17O75943 681 aa20.42■□□□□ 0.86
MRPL28-210ENST00000483764 APPP05067 770 aa20.42■□□□□ 0.86
MRPL28-210ENST00000483764 RNF20Q5VTR2 975 aa20.42■□□□□ 0.86
MRPL28-210ENST00000483764 KCNB2Q92953 911 aa20.42■□□□□ 0.86
MRPL28-210ENST00000483764 AATFQ9NY61 560 aaKnown RBP eCLIP20.42■□□□□ 0.86
MRPL28-210ENST00000483764 CTNNA3Q9UI47 895 aa20.42■□□□□ 0.86
MRPL28-210ENST00000483764 SLC4A4Q9Y6R1 1079 aa20.42■□□□□ 0.86
MRPL28-210ENST00000483764 GOLGA6L22H0YM25 854 aa20.41■□□□□ 0.86
MRPL28-210ENST00000483764 SLC27A2O14975 620 aa20.41■□□□□ 0.86
MRPL28-210ENST00000483764 BAG3O95817 575 aa20.41■□□□□ 0.86
MRPL28-210ENST00000483764 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
MRPL28-210ENST00000483764 NOL10Q9BSC4 688 aaKnown RBP20.41■□□□□ 0.86
MRPL28-210ENST00000483764 MAST2Q6P0Q8 1798 aa20.41■□□□□ 0.86
MRPL28-210ENST00000483764 SCN9AQ15858 1988 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 GSG1L2A8MUP6 293 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 PRKAB2O43741 272 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 FGAP02671 866 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 VIL1P09327 827 aaKnown RBP20.4■□□□□ 0.86
MRPL28-210ENST00000483764 ZKSCAN1P17029 563 aaPredicted RBP20.4■□□□□ 0.86
MRPL28-210ENST00000483764 PPP4CP60510 307 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 SNX14Q9Y5W7 946 aa20.4■□□□□ 0.86
MRPL28-210ENST00000483764 GAKO14976 1311 aa20.39■□□□□ 0.86
MRPL28-210ENST00000483764 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.86
MRPL28-210ENST00000483764 GPR75-ASB3A0A0A6YYF3 556 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 PSMD14O00487 310 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 PRELPP51888 382 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 CXCL9Q07325 125 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 ALX1Q15699 326 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 RSBN1LQ6PCB5 846 aaPredicted RBP20.39■□□□□ 0.85
MRPL28-210ENST00000483764 CERS3Q8IU89 383 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 MRIQ9BWK5 157 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 RPAP1Q9BWH6 1393 aaPredicted RBP20.39■□□□□ 0.85
MRPL28-210ENST00000483764 MYO3BQ8WXR4 1341 aa20.39■□□□□ 0.85
MRPL28-210ENST00000483764 SCNN1DP51172 638 aa20.38■□□□□ 0.85
MRPL28-210ENST00000483764 HHIPL2Q6UWX4 724 aa20.38■□□□□ 0.85
MRPL28-210ENST00000483764 IFNL3Q8IZI9 196 aa20.38■□□□□ 0.85
MRPL28-210ENST00000483764 CRNKL1Q9BZJ0 848 aaKnown RBP20.38■□□□□ 0.85
MRPL28-210ENST00000483764 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
MRPL28-210ENST00000483764 CYP21A2P08686 494 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.859e-6■□□□□ 10.4
MRPL28-210ENST00000483764 BTDP43251 543 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 HDLBPQ00341 1268 aaKnown RBP20.37■□□□□ 0.85
MRPL28-210ENST00000483764 TSGA10IPQ3SY00 556 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 CIAPIN1Q6FI81 312 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 TEKT1Q969V4 418 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 DAGLAQ9Y4D2 1042 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 TNIP1Q15025 636 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 IMMTQ16891 758 aaKnown RBP20.37■□□□□ 0.85
MRPL28-210ENST00000483764 SPRYD3Q8NCJ5 442 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 SDR42E1Q8WUS8 393 aa20.37■□□□□ 0.85
MRPL28-210ENST00000483764 EPB41L4AQ9HCS5 686 aaPredicted RBP20.37■□□□□ 0.85
MRPL28-210ENST00000483764 PLCG2P16885 1265 aa20.36■□□□□ 0.85
MRPL28-210ENST00000483764 LMNB1P20700 586 aa20.36■□□□□ 0.85
MRPL28-210ENST00000483764 CRKP46108 304 aa20.36■□□□□ 0.85
MRPL28-210ENST00000483764 SH3RF3Q8TEJ3 882 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-210ENST00000483764 GMLQ99445 158 aa20.36■□□□□ 0.85
MRPL28-210ENST00000483764 NAPBQ9H115 298 aa20.36■□□□□ 0.85
MRPL28-210ENST00000483764 ZMYM6O95789 1325 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 FZD9O00144 591 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 ZNF213O14771 459 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 TDO2P48775 406 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 GIMAP6Q6P9H5 292 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 AGBL3Q8NEM8 1001 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 TNPO1Q92973 898 aaKnown RBP20.35■□□□□ 0.85
MRPL28-210ENST00000483764 ATP8A2Q9NTI2 1148 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 SERPINA10Q9UK55 444 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 TAF6LQ9Y6J9 622 aa20.35■□□□□ 0.85
MRPL28-210ENST00000483764 TRAK2O60296 914 aa20.34■□□□□ 0.85
MRPL28-210ENST00000483764 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
MRPL28-210ENST00000483764 KRT32Q14532 448 aa20.34■□□□□ 0.85
MRPL28-210ENST00000483764 ZDHHC15Q96MV8 337 aa20.34■□□□□ 0.85
MRPL28-210ENST00000483764 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-210ENST00000483764 ZNF646O15015 1829 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-210ENST00000483764 RHBDL3P58872 404 aa20.33■□□□□ 0.85
MRPL28-210ENST00000483764 ADCK5Q3MIX3 580 aa20.33■□□□□ 0.85
MRPL28-210ENST00000483764 JAKMIP1Q96N16 626 aaKnown RBP20.33■□□□□ 0.85
MRPL28-210ENST00000483764 TM6SF1Q9BZW5 370 aa20.33■□□□□ 0.85
MRPL28-210ENST00000483764 MYH2Q9UKX2 1941 aa20.33■□□□□ 0.84
MRPL28-210ENST00000483764 CD2BP2O95400 341 aaKnown RBP20.32■□□□□ 0.84
MRPL28-210ENST00000483764 USP5P45974 858 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
MRPL28-210ENST00000483764 HAND2P61296 217 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 APOBEC3HQ6NTF7 200 aaKnown RBP20.32■□□□□ 0.84
MRPL28-210ENST00000483764 INTS4Q96HW7 963 aaKnown RBP20.32■□□□□ 0.84
MRPL28-210ENST00000483764 DCP1AQ9NPI6 582 aaPredicted RBP20.32■□□□□ 0.84
MRPL28-210ENST00000483764 HDAC9Q9UKV0 1011 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 PSMA5P28066 241 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 NEK4P51957 841 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 GPR162Q16538 588 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 TEX11Q8IYF3 940 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 OGFOD1Q8N543 542 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 PSME4Q14997 1843 aa20.32■□□□□ 0.84
MRPL28-210ENST00000483764 USP17L8P0C7I0 530 aa20.31■□□□□ 0.84
MRPL28-210ENST00000483764 TGFBRAP1Q8WUH2 860 aa20.31■□□□□ 0.84
MRPL28-210ENST00000483764 UPF3BQ9BZI7 483 aaKnown RBP20.31■□□□□ 0.84
MRPL28-210ENST00000483764 ZSWIM6Q9HCJ5 1215 aa20.31■□□□□ 0.84
MRPL28-210ENST00000483764 USP40Q9NVE5 1235 aa20.31■□□□□ 0.84
MRPL28-210ENST00000483764 E7EWF7 191 aa20.3■□□□□ 0.84
MRPL28-210ENST00000483764 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms