RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 MYH7P12883 1935 aa18.98■□□□□ 0.63
RPP40-206ENST00000483546 CENPBP07199 599 aaPredicted RBP18.98■□□□□ 0.63
RPP40-206ENST00000483546 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
RPP40-206ENST00000483546 RASA3Q14644 834 aa18.98■□□□□ 0.63
RPP40-206ENST00000483546 ANKRD45Q5TZF3 282 aa18.98■□□□□ 0.63
RPP40-206ENST00000483546 CDC42EP5Q6NZY7 148 aa18.98■□□□□ 0.63
RPP40-206ENST00000483546 SAPCD2Q86UD0 394 aa18.98■□□□□ 0.63
RPP40-206ENST00000483546 NOL10Q9BSC4 688 aaKnown RBP18.98■□□□□ 0.63
RPP40-206ENST00000483546 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
RPP40-206ENST00000483546 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
RPP40-206ENST00000483546 CNTNAP1P78357 1384 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 ERC2O15083 957 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 IDH1O75874 414 aaKnown RBP18.97■□□□□ 0.63
RPP40-206ENST00000483546 BAG3O95817 575 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 PLCG2P16885 1265 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 BTDP43251 543 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 ZNF384Q8TF68 577 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 HOOK2Q96ED9 719 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 USP40Q9NVE5 1235 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 PAG1Q9NWQ8 432 aa18.97■□□□□ 0.63
RPP40-206ENST00000483546 TCP10L2B9ZVM9 353 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
RPP40-206ENST00000483546 DEFB115Q30KQ5 88 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 DLK2Q6UY11 383 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 DNAJC5GQ8N7S2 189 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 KLRG1Q96E93 195 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 DNAJC2Q99543 621 aaKnown RBP18.96■□□□□ 0.63
RPP40-206ENST00000483546 IDI2Q9BXS1 227 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 BOLA2Q9H3K6 86 aa18.96■□□□□ 0.63
RPP40-206ENST00000483546 GOLIM4O00461 696 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 ENTPD3O75355 529 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 IGHDP01880 384 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 MX1P20591 662 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 ECE1P42892 770 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 PPP4CP60510 307 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 HTRA3P83110 453 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 FAM151AQ8WW52 585 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
RPP40-206ENST00000483546 SCAF8Q9UPN6 1271 aaKnown RBP18.95■□□□□ 0.62
RPP40-206ENST00000483546 RFX7Q2KHR2 1363 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 AK9Q5TCS8 1911 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 UNCXA6NJT0 531 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
RPP40-206ENST00000483546 GLRX3O76003 335 aaKnown RBP18.94■□□□□ 0.62
RPP40-206ENST00000483546 HUNKP57058 714 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 ARMC9Q7Z3E5 817 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.94■□□□□ 0.62
RPP40-206ENST00000483546 NDUFB9Q9Y6M9 179 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 FOCADQ5VW36 1801 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 SALL3Q9BXA9 1300 aa18.94■□□□□ 0.62
RPP40-206ENST00000483546 CYP7A1P22680 504 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 CACNB3P54284 484 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 RHBDL3P58872 404 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 MAP3K11Q16584 847 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 PRAMEF18Q5VWM3 479 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 MAGEB6Q8N7X4 407 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 TEPSINQ96N21 525 aa18.93■□□□□ 0.62
RPP40-206ENST00000483546 CDK5RAP2Q96SN8 1893 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
RPP40-206ENST00000483546 NUCB1Q02818 461 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 TTLL12Q14166 644 aaPredicted RBP18.92■□□□□ 0.62
RPP40-206ENST00000483546 ZSCAN25Q6NSZ9 544 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 CHD1LQ86WJ1 897 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 TMEM39BQ9GZU3 492 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 STAP2Q9UGK3 403 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 MKRN1Q9UHC7 482 aaKnown RBP18.92■□□□□ 0.62
RPP40-206ENST00000483546 SSC5DA1L4H1 1573 aa18.92■□□□□ 0.62
RPP40-206ENST00000483546 WDHD1O75717 1129 aaPredicted RBP18.91■□□□□ 0.62
RPP40-206ENST00000483546 NFIAQ12857 509 aa18.91■□□□□ 0.62
RPP40-206ENST00000483546 LRRFIP1Q32MZ4 808 aaKnown RBP18.91■□□□□ 0.62
RPP40-206ENST00000483546 NBPF12Q5TAG4 269 aaPredicted RBP18.91■□□□□ 0.62
RPP40-206ENST00000483546 SLC9C2Q5TAH2 1124 aa18.91■□□□□ 0.62
RPP40-206ENST00000483546 PI4K2BQ8TCG2 481 aa18.91■□□□□ 0.62
RPP40-206ENST00000483546 AATFQ9NY61 560 aaKnown RBP eCLIP18.91■□□□□ 0.62
RPP40-206ENST00000483546 FAM198AQ9UFP1 575 aa18.91■□□□□ 0.62
RPP40-206ENST00000483546 THSD7BQ9C0I4 1608 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 PDE6AP16499 860 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 IREB2P48200 963 aaKnown RBP18.9■□□□□ 0.62
RPP40-206ENST00000483546 RGS3P49796 1198 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 DCAF15Q66K64 600 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 RGMBQ6NW40 437 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 ADGRA1Q86SQ6 560 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 CCDC102AQ96A19 550 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 LNPKQ9C0E8 428 aa18.9■□□□□ 0.62
RPP40-206ENST00000483546 CEP350Q5VT06 3117 aa18.89■□□□□ 0.62
RPP40-206ENST00000483546 NEFLP07196 543 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 PDE1AP54750 535 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 UBE3CQ15386 1083 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 B4GALNT3Q6L9W6 998 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 TEX11Q8IYF3 940 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 JMYQ8N9B5 988 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 KBTBD3Q8NAB2 608 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 OTUD7AQ8TE49 926 aaPredicted RBP18.89■□□□□ 0.61
RPP40-206ENST00000483546 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 ANGEL1Q9UNK9 670 aaKnown RBP18.89■□□□□ 0.61
RPP40-206ENST00000483546 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
RPP40-206ENST00000483546 ADD2P35612 726 aa18.88■□□□□ 0.61
RPP40-206ENST00000483546 VEGFBP49765 207 aa18.88■□□□□ 0.61
RPP40-206ENST00000483546 TCP10Q12799 353 aa18.88■□□□□ 0.61
RPP40-206ENST00000483546 LDLRAD1Q5T700 205 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms