RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ZKSCAN3Q9BRR0 538 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 FOXD3Q9UJU5 478 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-217ENST00000483442 ABCA6Q8N139 1617 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 REREQ9P2R6 1566 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 A2ML1A8K2U0 1454 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 COBLO75128 1261 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 SSFA2P28290 1259 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 MZF1P28698 734 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-217ENST00000483442 PHLDB3Q6NSJ2 640 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-217ENST00000483442 CCDC97Q96F63 343 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-217ENST00000483442 FAM83CQ9BQN1 747 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 OSGEPQ9NPF4 335 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 LATS2Q9NRM7 1088 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 SERPINA10Q9UK55 444 aa5.8□□□□□ -1.48
LRCH3-217ENST00000483442 TROQ12816 1431 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-217ENST00000483442 CEP170BQ9Y4F5 1589 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-217ENST00000483442 ALKQ9UM73 1620 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 GSC2O15499 205 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 SPINK2P20155 84 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 HOXA10P31260 410 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-217ENST00000483442 PEAR1Q5VY43 1037 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-217ENST00000483442 BEND4Q6ZU67 534 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 CLEC10AQ8IUN9 316 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 TMEM102Q8N9M5 508 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-217ENST00000483442 SHKBP1Q8TBC3 707 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 OSMRQ99650 979 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 DBNDD2Q9BQY9 259 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 RUSC1Q9BVN2 902 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 KCNF1Q9H3M0 494 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 NPHP4O75161 1426 aaPredicted RBP5.79□□□□□ -1.48
LRCH3-217ENST00000483442 CLIP1P30622 1438 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 MYO5CQ9NQX4 1742 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 TNRQ92752 1358 aa5.79□□□□□ -1.48
LRCH3-217ENST00000483442 WASHC2CQ9Y4E1 1318 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 KIF14Q15058 1648 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 KIF3BO15066 747 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 FZD6O60353 706 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 TNFRSF21O75509 655 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 NPR3P17342 541 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
LRCH3-217ENST00000483442 CABP4P57796 275 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 SGO2Q562F6 1265 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 SUPT6HQ7KZ85 1726 aaKnown RBP5.78□□□□□ -1.48
LRCH3-217ENST00000483442 WNT8BQ93098 351 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 RNF208Q9H0X6 261 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 GTF3C3Q9Y5Q9 886 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 LRRC7Q96NW7 1537 aa5.78□□□□□ -1.48
LRCH3-217ENST00000483442 DNMT1P26358 1616 aaKnown RBP5.77□□□□□ -1.48
LRCH3-217ENST00000483442 MEGF11A6BM72 1044 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 METTL12A8MUP2 240 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 SART1O43290 800 aaKnown RBP5.77□□□□□ -1.49
LRCH3-217ENST00000483442 RPLP1P05386 114 aaKnown RBP5.77□□□□□ -1.49
LRCH3-217ENST00000483442 C19orf57Q0VDD7 668 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 MEX3CQ5U5Q3 659 aaKnown RBP5.77□□□□□ -1.49
LRCH3-217ENST00000483442 ANKRD34AQ69YU3 496 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 MFSD14AQ96MC6 490 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 TMPRSS13Q9BYE2 586 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 C1orf115Q9H7X2 142 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 ANO2Q9NQ90 1003 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 CCDC87Q9NVE4 849 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 CFDP1Q9UEE9 299 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-217ENST00000483442 CLTCQ00610 1675 aaKnown RBP5.77□□□□□ -1.49
LRCH3-217ENST00000483442 KIDINS220Q9ULH0 1771 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 MYO3AQ8NEV4 1616 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 A2MP01023 1474 aa5.77□□□□□ -1.49
LRCH3-217ENST00000483442 VWDEQ8N2E2 1590 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 MROH2AA6NES4 1674 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 FMN1Q68DA7 1419 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 MIA2Q96PC5 1412 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 LOC100289279A0A1B0GTE1 492 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 WDR64B1ANS9 1081 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 POLR3DP05423 398 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-217ENST00000483442 DRD2P14416 443 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 RXRBP28702 533 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 TXNDC2Q86VQ3 553 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 DTX1Q86Y01 620 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 CCDC82Q8N4S0 544 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 BSNDQ8WZ55 320 aa5.76□□□□□ -1.49
LRCH3-217ENST00000483442 FAM135BQ49AJ0 1406 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 CDC42BPBQ9Y5S2 1711 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 FAM177BA6PVY3 158 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 PHACTR2O75167 634 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 TIAF1O95411 115 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 ESRRAP11474 423 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-217ENST00000483442 TAL1P17542 331 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-217ENST00000483442 LTKP29376 864 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 IKBKEQ14164 716 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 ZNF772Q68DY9 489 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-217ENST00000483442 FDX2Q6P4F2 183 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 ASAP3Q8TDY4 903 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 PMEPA1Q969W9 287 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 NEURL4Q96JN8 1562 aa5.75□□□□□ -1.49
LRCH3-217ENST00000483442 ZNF142P52746 1687 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-217ENST00000483442 ZNF644Q9H582 1327 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-217ENST00000483442 ABCC1P33527 1531 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 FAM135AQ9P2D6 1515 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 F13BP05160 661 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms