RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MRIQ9BWK5 157 aa21.57■■□□□ 1.04
CPNE1-224ENST00000483359 VEZTQ9HBM0 779 aa21.57■■□□□ 1.04
CPNE1-224ENST00000483359 LDHCP07864 332 aa21.56■■□□□ 1.04
CPNE1-224ENST00000483359 TCRBV5S4A2TA0A5A2 114 aa21.56■■□□□ 1.04
CPNE1-224ENST00000483359 MAP1SQ66K74 1059 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-224ENST00000483359 LDHDQ86WU2 507 aa21.56■■□□□ 1.04
CPNE1-224ENST00000483359 SDSP20132 328 aa21.55■■□□□ 1.04
CPNE1-224ENST00000483359 ZSCAN25Q6NSZ9 544 aa21.55■■□□□ 1.04
CPNE1-224ENST00000483359 FAM163AQ96GL9 167 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-224ENST00000483359 NOL10Q9BSC4 688 aaKnown RBP21.55■■□□□ 1.04
CPNE1-224ENST00000483359 GPR75-ASB3A0A0A6YYF3 556 aa21.54■■□□□ 1.04
CPNE1-224ENST00000483359 DYNLL1P63167 89 aaKnown RBP21.54■■□□□ 1.04
CPNE1-224ENST00000483359 CDC42EP5Q6NZY7 148 aa21.54■■□□□ 1.04
CPNE1-224ENST00000483359 USP40Q9NVE5 1235 aa21.54■■□□□ 1.04
CPNE1-224ENST00000483359 ZNF70Q9UC06 446 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-224ENST00000483359 RNF113AO15541 343 aaKnown RBP21.53■■□□□ 1.04
CPNE1-224ENST00000483359 SPDYE2Q495Y8 402 aa21.53■■□□□ 1.04
CPNE1-224ENST00000483359 DCPSQ96C86 337 aaKnown RBP21.53■■□□□ 1.04
CPNE1-224ENST00000483359 TCP10L2B9ZVM9 353 aa21.52■■□□□ 1.04
CPNE1-224ENST00000483359 UBE3CQ15386 1083 aa21.52■■□□□ 1.04
CPNE1-224ENST00000483359 SH3RF3Q8TEJ3 882 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-224ENST00000483359 ZC3H15Q8WU90 426 aaKnown RBP21.52■■□□□ 1.04
CPNE1-224ENST00000483359 IGSF3O75054 1194 aa21.52■■□□□ 1.04
CPNE1-224ENST00000483359 BAG3O95817 575 aa21.52■■□□□ 1.04
CPNE1-224ENST00000483359 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
CPNE1-224ENST00000483359 DLK2Q6UY11 383 aa21.52■■□□□ 1.04
CPNE1-224ENST00000483359 PUS7LQ9H0K6 701 aaKnown RBP21.52■■□□□ 1.04
CPNE1-224ENST00000483359 TMOD2Q9NZR1 351 aa21.52■■□□□ 1.04
CPNE1-224ENST00000483359 MAGEB6P1A0A0J9YX57 407 aa21.51■■□□□ 1.03
CPNE1-224ENST00000483359 ADM5C9JUS6 153 aa21.51■■□□□ 1.03
CPNE1-224ENST00000483359 ZFYP08048 801 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-224ENST00000483359 CHADLQ6NUI6 762 aa21.51■■□□□ 1.03
CPNE1-224ENST00000483359 SEC62Q99442 399 aaKnown RBP21.51■■□□□ 1.03
CPNE1-224ENST00000483359 GLIS2Q9BZE0 524 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-224ENST00000483359 POLR2AP24928 1970 aaKnown RBP21.51■■□□□ 1.03
CPNE1-224ENST00000483359 TOMM70O94826 608 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 MBD4O95243 580 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 RHBDL3P58872 404 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 NFIAQ12857 509 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 PICALMQ13492 652 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 KRT26Q7Z3Y9 468 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 LCORLQ8N3X6 602 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 APPBP2Q92624 585 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 OSBP2Q969R2 916 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 ARMT1Q9H993 441 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 SULF1Q8IWU6 871 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 FAM227BQ96M60 508 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 RIOK1Q9BRS2 568 aaKnown RBP21.5■■□□□ 1.03
CPNE1-224ENST00000483359 PGAP2Q9UHJ9 254 aa21.5■■□□□ 1.03
CPNE1-224ENST00000483359 M0R2C6 588 aa21.49■■□□□ 1.03
CPNE1-224ENST00000483359 TCP10Q12799 353 aa21.49■■□□□ 1.03
CPNE1-224ENST00000483359 USP48Q86UV5 1035 aa21.49■■□□□ 1.03
CPNE1-224ENST00000483359 TEX11Q8IYF3 940 aa21.49■■□□□ 1.03
CPNE1-224ENST00000483359 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
CPNE1-224ENST00000483359 BMP2KLQ5H9B9 411 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 PRAMEF18Q5VWM3 479 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 TMED8Q6PL24 325 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-224ENST00000483359 APOBEC3FQ8IUX4 373 aaKnown RBP21.48■■□□□ 1.03
CPNE1-224ENST00000483359 RFX7Q2KHR2 1363 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 PITPNM2Q9BZ72 1349 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 A0A0D9SFI3 127 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 WDHD1O75717 1129 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-224ENST00000483359 PPP4CP60510 307 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 NMIQ13287 307 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-224ENST00000483359 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
CPNE1-224ENST00000483359 TRAF5O00463 557 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 PLCG2P16885 1265 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 FMR1Q06787 632 aaKnown RBP eCLIP21.47■■□□□ 1.037e-7■■■□□ 18.6
CPNE1-224ENST00000483359 ZMYM1Q5SVZ6 1142 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 CWC27Q6UX04 472 aaKnown RBP21.47■■□□□ 1.03
CPNE1-224ENST00000483359 SMC1BQ8NDV3 1235 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 DDX4Q9NQI0 724 aaKnown RBP21.47■■□□□ 1.03
CPNE1-224ENST00000483359 CDK5RAP2Q96SN8 1893 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 CCDC129Q6ZRS4 1044 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 CDC37L1Q7L3B6 337 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 TGFBRAP1Q8WUH2 860 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 TMEM39BQ9GZU3 492 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 DEFB129Q9H1M3 183 aa21.47■■□□□ 1.03
CPNE1-224ENST00000483359 CNTNAP1P78357 1384 aa21.46■■□□□ 1.03
CPNE1-224ENST00000483359 TNFAIP1Q13829 316 aa21.46■■□□□ 1.03
CPNE1-224ENST00000483359 RASA3Q14644 834 aa21.46■■□□□ 1.03
CPNE1-224ENST00000483359 MAPKAPK5Q8IW41 473 aa21.46■■□□□ 1.03
CPNE1-224ENST00000483359 RBM46Q8TBY0 533 aaKnown RBP21.46■■□□□ 1.03
CPNE1-224ENST00000483359 SDR42E1Q8WUS8 393 aa21.46■■□□□ 1.03
CPNE1-224ENST00000483359 FAM198AQ9UFP1 575 aa21.46■■□□□ 1.03
CPNE1-224ENST00000483359 GPAA1O43292 621 aa21.45■■□□□ 1.02
CPNE1-224ENST00000483359 CDAN1Q8IWY9 1227 aa21.45■■□□□ 1.02
CPNE1-224ENST00000483359 PRKAB2O43741 272 aa21.45■■□□□ 1.02
CPNE1-224ENST00000483359 USP5P45974 858 aa21.45■■□□□ 1.02
CPNE1-224ENST00000483359 TNNI2P48788 182 aa21.45■■□□□ 1.02
CPNE1-224ENST00000483359 ZFPM1Q8IX07 1006 aa21.45■■□□□ 1.02
CPNE1-224ENST00000483359 FOCADQ5VW36 1801 aa21.44■■□□□ 1.02
CPNE1-224ENST00000483359 SLC4A8Q2Y0W8 1093 aa21.44■■□□□ 1.02
CPNE1-224ENST00000483359 IDI2Q9BXS1 227 aa21.44■■□□□ 1.02
CPNE1-224ENST00000483359 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
CPNE1-224ENST00000483359 ZNF408Q9H9D4 720 aa21.44■■□□□ 1.02
CPNE1-224ENST00000483359 FLT1P17948 1338 aa21.44■■□□□ 1.02
CPNE1-224ENST00000483359 HIP1O00291 1037 aa21.43■■□□□ 1.02
CPNE1-224ENST00000483359 CERS3Q8IU89 383 aa21.43■■□□□ 1.02
CPNE1-224ENST00000483359 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms