RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 IL25Q9H293 177 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.98
COL4A5-205ENST00000483338 ADGRF5Q8IZF2 1346 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 KDM5AP29375 1690 aaKnown RBP8.9□□□□□ -0.99
COL4A5-205ENST00000483338 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.99
COL4A5-205ENST00000483338 PAX3P23760 479 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 CDC25CP30307 473 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 GGCXP38435 758 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 PDE1AP54750 535 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 DDX46Q7L014 1031 aaKnown RBP8.9□□□□□ -0.99
COL4A5-205ENST00000483338 YTHDF3Q7Z739 585 aaKnown RBP8.9□□□□□ -0.99
COL4A5-205ENST00000483338 MFN1Q8IWA4 741 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 CCDC12Q8WUD4 166 aaPredicted RBP8.9□□□□□ -0.99
COL4A5-205ENST00000483338 FBXW7Q969H0 707 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 GBP3Q9H0R5 595 aa8.9□□□□□ -0.99
COL4A5-205ENST00000483338 ABCC3O15438 1527 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
COL4A5-205ENST00000483338 HSPA4P34932 840 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 FCHSD1Q86WN1 690 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 TRIM42Q8IWZ5 723 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 FUKQ8N0W3 1084 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 ZCWPW1Q9H0M4 648 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 TRPC6Q9Y210 931 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 EVC2Q86UK5 1308 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 SSH2Q76I76 1423 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 NDUFAB1O14561 156 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 PAPOLAP51003 745 aaKnown RBP8.89□□□□□ -0.99
COL4A5-205ENST00000483338 SCNN1BP51168 640 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 ST3GAL1Q11201 340 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 TMEM139Q8IV31 216 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
COL4A5-205ENST00000483338 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
COL4A5-205ENST00000483338 GOLGA6CA6NDK9 693 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 AGPSO00116 658 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 BIN1O00499 593 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 PES1O00541 588 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 GOLGA6DP0CG33 693 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 SLC8A1P32418 973 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 MTHFSP49914 203 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ZRSR2Q15696 482 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 HSP90AB2PQ58FF8 381 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 CCDC50Q8IVM0 306 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 CEP57L1Q8IYX8 460 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 NSMCE1Q8WV22 266 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ANO10Q9NW15 660 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 GOLGA6AQ9NYA3 693 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ATP10DQ9P241 1426 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 AGLP35573 1532 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ERICH2A1L162 156 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 CPA1P15085 419 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 TMPOP42166 694 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 SF3B2Q13435 895 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 RASA3Q14644 834 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ARHGAP22Q7Z5H3 698 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 BICD1Q96G01 975 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 RBM17Q96I25 401 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 LZTS2Q9BRK4 669 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 CORO1CQ9ULV4 474 aaPredicted RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 RNF8O76064 485 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 LINGO3P0C6S8 592 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 RNF187Q5TA31 235 aaPredicted RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 SPATS2Q86XZ4 545 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ANKRD44Q8N8A2 993 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ATL2Q8NHH9 583 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 ACSBG1Q96GR2 724 aa8.88□□□□□ -0.99
COL4A5-205ENST00000483338 PAPOLBQ9NRJ5 636 aaKnown RBP8.88□□□□□ -0.99
COL4A5-205ENST00000483338 PLA2R1Q13018 1463 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 KDM4FA0A1W2PPD8 638 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 RASSF8Q8NHQ8 419 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 OSBPL9Q96SU4 736 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 SH3GL2Q99962 352 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 RANBP17Q9H2T7 1088 aaKnown RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 MMADHCQ9H3L0 296 aaPredicted RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 CDC23Q9UJX2 597 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 SNX14Q9Y5W7 946 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 ROR2Q01974 943 aaKnown RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 TMEM62Q0P6H9 643 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 TOGARAM2Q6ZUX3 1019 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 KIAA0825Q8IV33 1275 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 SPAG5Q96R06 1193 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 GCLCP48506 637 aaPredicted RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 KARSQ15046 597 aaKnown RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 RRP12Q5JTH9 1297 aaKnown RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 RBM41Q96IZ5 413 aaKnown RBP8.87□□□□□ -0.99
COL4A5-205ENST00000483338 CCDC114Q96M63 670 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 ALS2CR12Q96Q35 445 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 PAGR1Q9BTK6 254 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 NUP58Q9BVL2 599 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 HYPKQ9NX55 129 aa8.87□□□□□ -0.99
COL4A5-205ENST00000483338 UGGT1Q9NYU2 1555 aa8.86□□□□□ -0.99
COL4A5-205ENST00000483338 GOLGA6L9A6NEM1 432 aa8.86□□□□□ -0.99
COL4A5-205ENST00000483338 OPLAHO14841 1288 aa8.86□□□□□ -0.99
COL4A5-205ENST00000483338 ARHGAP6O43182 974 aa8.86□□□□□ -0.99
COL4A5-205ENST00000483338 KIF4AO95239 1232 aa8.86□□□□□ -0.99
COL4A5-205ENST00000483338 STIM1Q13586 685 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms