RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PRPF40BQ6NWY9 871 aaKnown RBP6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 ZAR1Q86SH2 424 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 GLIS3Q8NEA6 775 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 DDX54Q8TDD1 881 aaKnown RBP6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 GATA6Q92908 595 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 WDR18Q9BV38 432 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 SEMA6CQ9H3T2 930 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 AOC2O75106 756 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 TAL1P17542 331 aaPredicted RBP6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 LIG1P18858 919 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 ASPAP45381 313 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 PI16Q6UXB8 463 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 ALKBH8Q96BT7 664 aaKnown RBP6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 DMRTB1Q96MA1 342 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 RBCK1Q9BYM8 510 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 ZC3H12CQ9C0D7 883 aaKnown RBP6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 ZFYVE1Q9HBF4 777 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 LGR6Q9HBX8 967 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 PPP1R9AQ9ULJ8 1098 aa6.19□□□□□ -1.42
LAPTM4A-202ENST00000483117 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 CYP26A1O43174 497 aa6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 DYNC1LI2O43237 492 aaPredicted RBP6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 PDE4CQ08493 712 aa6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 AP3B2Q13367 1082 aa6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 MAP7Q14244 749 aa6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 TMC7Q7Z402 723 aa6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 WDR89Q96FK6 387 aaPredicted RBP6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 GSX1Q9H4S2 264 aaPredicted RBP6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 BIN2Q9UBW5 565 aaPredicted RBP6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 TRAK1Q9UPV9 953 aa6.18□□□□□ -1.42
LAPTM4A-202ENST00000483117 FCGRTP55899 365 aa6.17□□□□□ -1.42
LAPTM4A-202ENST00000483117 CPSF6Q16630 551 aaKnown RBP eCLIP6.17□□□□□ -1.42
LAPTM4A-202ENST00000483117 RPS26P11Q5JNZ5 115 aaPredicted RBP6.17□□□□□ -1.42
LAPTM4A-202ENST00000483117 CCDC86Q9H6F5 360 aaKnown RBP6.17□□□□□ -1.42
LAPTM4A-202ENST00000483117 CCDC39Q9UFE4 941 aa6.17□□□□□ -1.42
LAPTM4A-202ENST00000483117 DAGLAQ9Y4D2 1042 aa6.17□□□□□ -1.42
LAPTM4A-202ENST00000483117 TMPRSS2O15393 492 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 SEZ6L2Q6UXD5 910 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 NFXL1Q6ZNB6 911 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 ZNF765Q7L2R6 523 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 LRRC4CQ9HCJ2 640 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 C1GALT1Q9NS00 363 aa6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 GPN3Q9UHW5 284 aaPredicted RBP6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
LAPTM4A-202ENST00000483117 ZNF862O60290 1169 aa6.15□□□□□ -1.42
LAPTM4A-202ENST00000483117 DUSP27Q5VZP5 1158 aa6.15□□□□□ -1.42
LAPTM4A-202ENST00000483117 BCO2Q9BYV7 579 aa6.15□□□□□ -1.42
LAPTM4A-202ENST00000483117 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.42
LAPTM4A-202ENST00000483117 ADGRE2Q9UHX3 823 aa6.15□□□□□ -1.42
LAPTM4A-202ENST00000483117 DCTN4Q9UJW0 460 aa6.15□□□□□ -1.42
LAPTM4A-202ENST00000483117 PRNPP04156 253 aa6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 GSTP1P09211 210 aaKnown RBP6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 ERICH6Q7L0X2 663 aa6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 CRIM1Q9NZV1 1036 aa6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 ZC3H7BQ9UGR2 993 aaKnown RBP6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 TIMELESSQ9UNS1 1208 aa6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 GNEQ9Y223 722 aaKnown RBP6.14□□□□□ -1.43
LAPTM4A-202ENST00000483117 PNMA6FA0A0J9YX94 578 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 MAPK1P28482 360 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 DSC3Q14574 896 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 NXPE4Q6UWF7 544 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 VSIG10LQ86VR7 867 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 KCNB2Q92953 911 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 FANCD2OSQ96PS1 177 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 PCDHGC5Q9Y5F6 944 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 SYNGAP1Q96PV0 1343 aa6.13□□□□□ -1.43
LAPTM4A-202ENST00000483117 BRD1O95696 1058 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 SLFN14P0C7P3 912 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 PLCB3Q01970 1234 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 CYP27A1Q02318 531 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 ID3Q02535 119 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 KIF4BQ2VIQ3 1234 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 OGFOD3Q6PK18 319 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 PDZD3Q86UT5 571 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 TP53INP2Q8IXH6 220 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 PIDD1Q9HB75 910 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 DISC1Q9NRI5 854 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 KRT82Q9NSB4 513 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 TMEM39AQ9NV64 488 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 BSDC1Q9NW68 430 aaPredicted RBP6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 PPP4R2Q9NY27 417 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 AKAP2Q9Y2D5 859 aa6.12□□□□□ -1.43
LAPTM4A-202ENST00000483117 TREHO43280 583 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 CDK5R2Q13319 367 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 ENOX2Q16206 610 aaKnown RBP6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 SULF2Q8IWU5 870 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 FLCNQ8NFG4 579 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 FBXL18Q96ME1 805 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 ATXN3LQ9H3M9 355 aa6.11□□□□□ -1.43
LAPTM4A-202ENST00000483117 RNGTTO60942 597 aaKnown RBP6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 FAM87AP0C7U9 286 aa6.1□□□□□ -1.43
LAPTM4A-202ENST00000483117 XRCC5P13010 732 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms