RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ARMCX5Q6P1M9 558 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 ORC3Q9UBD5 711 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-213ENST00000482878 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC78-213ENST00000482878 GOLGA8BA8MQT2 603 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 KCND1Q9NSA2 647 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 DNAI1Q9UI46 699 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 JRKLQ9Y4A0 524 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 ANTXR2P58335 489 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 SCARF1Q14162 830 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 SMC1AQ14683 1233 aaKnown RBP14.29□□□□□ -0.12
CCDC78-213ENST00000482878 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
CCDC78-213ENST00000482878 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-213ENST00000482878 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 TMEM94Q12767 1356 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 ZNF202O95125 648 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 YEATS4O95619 227 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
CCDC78-213ENST00000482878 TMC6Q7Z403 805 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 MB21D2Q8IYB1 491 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-213ENST00000482878 BPIFA3Q9BQP9 254 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 IMPACTQ9P2X3 320 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
CCDC78-213ENST00000482878 NCAPHQ15003 741 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 SRLQ86TD4 932 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
CCDC78-213ENST00000482878 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 CIAO1O76071 339 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 E2F4Q16254 413 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-213ENST00000482878 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
CCDC78-213ENST00000482878 EPC1Q9H2F5 836 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 CEP126Q9P2H0 1117 aa14.28□□□□□ -0.12
CCDC78-213ENST00000482878 GLI3P10071 1580 aa14.27□□□□□ -0.12
CCDC78-213ENST00000482878 TTC39AQ5SRH9 613 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 PI16Q6UXB8 463 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC78-213ENST00000482878 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 MST1RQ04912 1400 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 ANKRD65E5RJM6 399 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 CPLX1O14810 134 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 WDHD1O75717 1129 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-213ENST00000482878 PFKFB1P16118 471 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 NLRP12P59046 1061 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 KIF23Q02241 960 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-213ENST00000482878 ANO1Q5XXA6 986 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 SYNE3Q6ZMZ3 975 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 BRAPQ7Z569 592 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 PPP1R13BQ96KQ4 1090 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 NCAPGQ9BPX3 1015 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.13
CCDC78-213ENST00000482878 MARCKSP29966 332 aaPredicted RBP14.26□□□□□ -0.13
CCDC78-213ENST00000482878 CCDC158Q5M9N0 1113 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 GOLGA5Q8TBA6 731 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 ZAP70P43403 619 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 EP400NLQ6ZTU2 488 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 AIFM3Q96NN9 605 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 CARD6Q9BX69 1037 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
CCDC78-213ENST00000482878 CLGNO14967 610 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 BRD2P25440 801 aaKnown RBP14.25□□□□□ -0.13
CCDC78-213ENST00000482878 LMOD1P29536 600 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-213ENST00000482878 CADPS2Q86UW7 1296 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 ATP1A3P13637 1013 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCDC78-213ENST00000482878 CMA1P23946 247 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 CCDC150Q8NCX0 1101 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 NCOA7Q8NI08 942 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 HSD3B7Q9H2F3 369 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
CCDC78-213ENST00000482878 BANK1Q8NDB2 785 aa14.25□□□□□ -0.13
CCDC78-213ENST00000482878 GUCY2CP25092 1073 aa14.24□□□□□ -0.13
CCDC78-213ENST00000482878 PIP4K2BP78356 416 aa14.24□□□□□ -0.13
CCDC78-213ENST00000482878 APPBP2Q92624 585 aa14.24□□□□□ -0.13
CCDC78-213ENST00000482878 ZNF213O14771 459 aa14.24□□□□□ -0.13
CCDC78-213ENST00000482878 GPAA1O43292 621 aa14.24□□□□□ -0.13
CCDC78-213ENST00000482878 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
CCDC78-213ENST00000482878 FANCCQ00597 558 aa14.24□□□□□ -0.13
CCDC78-213ENST00000482878 LRRFIP1Q32MZ4 808 aaKnown RBP14.24□□□□□ -0.13
CCDC78-213ENST00000482878 RXRAP19793 462 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 SLC39A14Q15043 492 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 L2HGDHQ9H9P8 463 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 ALS2Q96Q42 1657 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 NWD2Q9ULI1 1742 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 PSDA5PKW4 1024 aaPredicted RBP14.23□□□□□ -0.13
CCDC78-213ENST00000482878 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 ARFGAP3Q9NP61 516 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 VPS18Q9P253 973 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
CCDC78-213ENST00000482878 ZRANB2O95218 330 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC78-213ENST00000482878 SYKP43405 635 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 KIF1AQ12756 1690 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms