RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PITPNM2Q9BZ72 1349 aa18.47■□□□□ 0.55
CCM2-215ENST00000482714 MAGEB6P1A0A0J9YX57 407 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 BTDP43251 543 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 NBPF9Q3BBW0 867 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 MCMDC2Q4G0Z9 681 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 NMRK2Q9NPI5 230 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 USP40Q9NVE5 1235 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 TMOD2Q9NZR1 351 aa18.46■□□□□ 0.55
CCM2-215ENST00000482714 GNAT2P19087 354 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.54
CCM2-215ENST00000482714 SPDYE2Q495Y8 402 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 CDC42EP5Q6NZY7 148 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 ADGRA1Q86SQ6 560 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 AIDAQ96BJ3 306 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 RIOK1Q9BRS2 568 aaKnown RBP18.46■□□□□ 0.54
CCM2-215ENST00000482714 IDI2Q9BXS1 227 aa18.46■□□□□ 0.54
CCM2-215ENST00000482714 MYH2Q9UKX2 1941 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 EGFRP00533 1210 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 CHMLP26374 656 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 RHBDL3P58872 404 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 TNFAIP1Q13829 316 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 LDHDQ86WU2 507 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
CCM2-215ENST00000482714 PUS7LQ9H0K6 701 aaKnown RBP18.45■□□□□ 0.54
CCM2-215ENST00000482714 TDRD3Q9H7E2 651 aaKnown RBP18.45■□□□□ 0.54
CCM2-215ENST00000482714 AATFQ9NY61 560 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCM2-215ENST00000482714 ZNF70Q9UC06 446 aaPredicted RBP18.45■□□□□ 0.54
CCM2-215ENST00000482714 TNNI2P48788 182 aa18.44■□□□□ 0.54
CCM2-215ENST00000482714 C1QTNF8P60827 252 aa18.44■□□□□ 0.54
CCM2-215ENST00000482714 FAM83AQ86UY5 434 aa18.44■□□□□ 0.54
CCM2-215ENST00000482714 APOBEC3FQ8IUX4 373 aaKnown RBP18.44■□□□□ 0.54
CCM2-215ENST00000482714 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
CCM2-215ENST00000482714 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
CCM2-215ENST00000482714 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
CCM2-215ENST00000482714 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
CCM2-215ENST00000482714 ENTPD3O75355 529 aa18.43■□□□□ 0.54
CCM2-215ENST00000482714 CDC45O75419 566 aa18.43■□□□□ 0.54
CCM2-215ENST00000482714 STRBPQ96SI9 672 aaKnown RBP18.43■□□□□ 0.54
CCM2-215ENST00000482714 CRNKL1Q9BZJ0 848 aaKnown RBP18.43■□□□□ 0.54
CCM2-215ENST00000482714 RAD50Q92878 1312 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 EAPPQ56P03 285 aaPredicted RBP18.42■□□□□ 0.54
CCM2-215ENST00000482714 GIMAP6Q6P9H5 292 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 ATP8A2Q9NTI2 1148 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 PCDHAC2Q9Y5I4 1007 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 PPP2R3BQ9Y5P8 575 aa18.42■□□□□ 0.54
CCM2-215ENST00000482714 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
CCM2-215ENST00000482714 KIF3CO14782 793 aa18.41■□□□□ 0.54
CCM2-215ENST00000482714 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
CCM2-215ENST00000482714 CWC27Q6UX04 472 aaKnown RBP18.41■□□□□ 0.54
CCM2-215ENST00000482714 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
CCM2-215ENST00000482714 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
CCM2-215ENST00000482714 MYH7P12883 1935 aa18.41■□□□□ 0.54
CCM2-215ENST00000482714 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 GPAA1O43292 621 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 WDHD1O75717 1129 aaPredicted RBP18.4■□□□□ 0.54
CCM2-215ENST00000482714 MBD4O95243 580 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 DYNLL1P63167 89 aaKnown RBP18.4■□□□□ 0.54
CCM2-215ENST00000482714 ANGEL2Q5VTE6 544 aaKnown RBP18.4■□□□□ 0.54
CCM2-215ENST00000482714 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
CCM2-215ENST00000482714 FAM151AQ8WW52 585 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 FAM227BQ96M60 508 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 TAOK2Q9UL54 1235 aa18.4■□□□□ 0.54
CCM2-215ENST00000482714 TOMM70O94826 608 aa18.39■□□□□ 0.54
CCM2-215ENST00000482714 CHGBP05060 677 aa18.39■□□□□ 0.54
CCM2-215ENST00000482714 SLFNL1Q499Z3 407 aa18.39■□□□□ 0.54
CCM2-215ENST00000482714 SULF1Q8IWU6 871 aa18.39■□□□□ 0.54
CCM2-215ENST00000482714 ARMT1Q9H993 441 aa18.39■□□□□ 0.54
CCM2-215ENST00000482714 A0A0D9SFI3 127 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 CLRN2A0PK11 232 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 USP5P45974 858 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 LCORLQ8N3X6 602 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
CCM2-215ENST00000482714 NACAP1Q9BZK3 213 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 DEFB129Q9H1M3 183 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 DHX36Q9H2U1 1008 aaKnown RBP18.39■□□□□ 0.53
CCM2-215ENST00000482714 VEZTQ9HBM0 779 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 GGA3Q9NZ52 723 aa18.39■□□□□ 0.53
CCM2-215ENST00000482714 AK9Q5TCS8 1911 aa18.38■□□□□ 0.53
CCM2-215ENST00000482714 M0R2C6 588 aa18.38■□□□□ 0.53
CCM2-215ENST00000482714 SGSM2O43147 1006 aa18.38■□□□□ 0.53
CCM2-215ENST00000482714 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
CCM2-215ENST00000482714 HOOK2Q96ED9 719 aa18.38■□□□□ 0.53
CCM2-215ENST00000482714 MKRN1Q9UHC7 482 aaKnown RBP18.38■□□□□ 0.53
CCM2-215ENST00000482714 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
CCM2-215ENST00000482714 CCDC171Q6TFL3 1326 aa18.37■□□□□ 0.53
CCM2-215ENST00000482714 RASA3Q14644 834 aa18.37■□□□□ 0.53
CCM2-215ENST00000482714 ALX1Q15699 326 aa18.37■□□□□ 0.53
CCM2-215ENST00000482714 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
CCM2-215ENST00000482714 RBM46Q8TBY0 533 aaKnown RBP18.37■□□□□ 0.53
CCM2-215ENST00000482714 FAM198AQ9UFP1 575 aa18.37■□□□□ 0.53
CCM2-215ENST00000482714 GSG1L2A8MUP6 293 aa18.36■□□□□ 0.53
CCM2-215ENST00000482714 TCP10L2B9ZVM9 353 aa18.36■□□□□ 0.53
CCM2-215ENST00000482714 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms