RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ANTXR1Q9H6X2 564 aa25.45■■□□□ 1.66
SEC13-217ENST00000482647 IDH1O75874 414 aaKnown RBP25.44■■□□□ 1.66
SEC13-217ENST00000482647 BTDP43251 543 aa25.44■■□□□ 1.66
SEC13-217ENST00000482647 FKBP1BP68106 108 aa25.44■■□□□ 1.66
SEC13-217ENST00000482647 DEFB115Q30KQ5 88 aa25.44■■□□□ 1.66
SEC13-217ENST00000482647 SMC5Q8IY18 1101 aa25.44■■□□□ 1.66
SEC13-217ENST00000482647 HAUS7Q99871 368 aa25.44■■□□□ 1.66
SEC13-217ENST00000482647 RASSF10A6NK89 507 aa25.43■■□□□ 1.66
SEC13-217ENST00000482647 GOLIM4O00461 696 aa25.43■■□□□ 1.66
SEC13-217ENST00000482647 TMED8Q6PL24 325 aaPredicted RBP25.43■■□□□ 1.66
SEC13-217ENST00000482647 FAM83AQ86UY5 434 aa25.43■■□□□ 1.66
SEC13-217ENST00000482647 KLRG1Q96E93 195 aa25.43■■□□□ 1.66
SEC13-217ENST00000482647 NOL10Q9BSC4 688 aaKnown RBP25.43■■□□□ 1.66
SEC13-217ENST00000482647 MKRN1Q9UHC7 482 aaKnown RBP25.43■■□□□ 1.66
SEC13-217ENST00000482647 PAG1Q9NWQ8 432 aa25.42■■□□□ 1.66
SEC13-217ENST00000482647 AKAP11Q9UKA4 1901 aa25.41■■□□□ 1.66
SEC13-217ENST00000482647 BAG3O95817 575 aa25.41■■□□□ 1.66
SEC13-217ENST00000482647 MAP4K4O95819 1239 aaPredicted RBP25.41■■□□□ 1.66
SEC13-217ENST00000482647 HUNKP57058 714 aa25.41■■□□□ 1.66
SEC13-217ENST00000482647 TTLL12Q14166 644 aaPredicted RBP25.41■■□□□ 1.66
SEC13-217ENST00000482647 HHIPL1Q96JK4 782 aa25.41■■□□□ 1.66
SEC13-217ENST00000482647 TMEM39BQ9GZU3 492 aa25.41■■□□□ 1.66
SEC13-217ENST00000482647 CNTNAP1P78357 1384 aa25.41■■□□□ 1.66
SEC13-217ENST00000482647 TTC41PQ6P2S7 1318 aa25.4■■□□□ 1.66
SEC13-217ENST00000482647 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
SEC13-217ENST00000482647 NBPF12Q5TAG4 269 aaPredicted RBP25.4■■□□□ 1.66
SEC13-217ENST00000482647 B4GALNT3Q6L9W6 998 aa25.4■■□□□ 1.66
SEC13-217ENST00000482647 TRPM7Q96QT4 1865 aa25.39■■□□□ 1.66
SEC13-217ENST00000482647 PPP1R12BO60237 982 aaPredicted RBP25.39■■□□□ 1.66
SEC13-217ENST00000482647 CYP7A1P22680 504 aa25.39■■□□□ 1.66
SEC13-217ENST00000482647 MAGEB6Q8N7X4 407 aa25.39■■□□□ 1.66
SEC13-217ENST00000482647 FAM151AQ8WW52 585 aa25.39■■□□□ 1.66
SEC13-217ENST00000482647 TEPSINQ96N21 525 aa25.39■■□□□ 1.66
SEC13-217ENST00000482647 IDI2Q9BXS1 227 aa25.39■■□□□ 1.66
SEC13-217ENST00000482647 ERC2O15083 957 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 MX1P20591 662 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 RHBDL3P58872 404 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 TCP10Q12799 353 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 NFIAQ12857 509 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 TSHZ3Q63HK5 1081 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 PAXIP1Q6ZW49 1069 aaPredicted RBP25.38■■□□□ 1.65
SEC13-217ENST00000482647 ARMC9Q7Z3E5 817 aa25.38■■□□□ 1.65
SEC13-217ENST00000482647 OTUD7AQ8TE49 926 aaPredicted RBP25.38■■□□□ 1.65
SEC13-217ENST00000482647 PLCG2P16885 1265 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 ECE1P42892 770 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 PPP4CP60510 307 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 NUCB1Q02818 461 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 PRKG1Q13976 671 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 SLC9C2Q5TAH2 1124 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 ADGRA1Q86SQ6 560 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 HOOK2Q96ED9 719 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 EDC3Q96F86 508 aaKnown RBP25.37■■□□□ 1.65
SEC13-217ENST00000482647 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
SEC13-217ENST00000482647 FAM198AQ9UFP1 575 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 ECM29Q5VYK3 1845 aa25.37■■□□□ 1.65
SEC13-217ENST00000482647 ENTPD3O75355 529 aa25.36■■□□□ 1.65
SEC13-217ENST00000482647 WDHD1O75717 1129 aaPredicted RBP25.36■■□□□ 1.65
SEC13-217ENST00000482647 GLRX3O76003 335 aaKnown RBP25.36■■□□□ 1.65
SEC13-217ENST00000482647 VEGFBP49765 207 aa25.36■■□□□ 1.65
SEC13-217ENST00000482647 CHD1LQ86WJ1 897 aa25.36■■□□□ 1.65
SEC13-217ENST00000482647 LNPKQ9C0E8 428 aa25.36■■□□□ 1.65
SEC13-217ENST00000482647 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.36■■□□□ 1.65
SEC13-217ENST00000482647 UBE2Q2LH0YL09 131 aa25.35■■□□□ 1.65
SEC13-217ENST00000482647 RGS3P49796 1198 aa25.35■■□□□ 1.65
SEC13-217ENST00000482647 MOB2Q70IA6 237 aa25.35■■□□□ 1.65
SEC13-217ENST00000482647 CERS3Q8IU89 383 aa25.35■■□□□ 1.65
SEC13-217ENST00000482647 ANGEL1Q9UNK9 670 aaKnown RBP25.35■■□□□ 1.65
SEC13-217ENST00000482647 MYH2Q9UKX2 1941 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 NPM3O75607 178 aaKnown RBP25.34■■□□□ 1.65
SEC13-217ENST00000482647 PDE6AP16499 860 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 CYP4F22Q6NT55 531 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 RGMBQ6NW40 437 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 CDAN1Q8IWY9 1227 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 TEX11Q8IYF3 940 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 SH3RF3Q8TEJ3 882 aaPredicted RBP25.34■■□□□ 1.65
SEC13-217ENST00000482647 CAPNS2Q96L46 248 aa25.34■■□□□ 1.65
SEC13-217ENST00000482647 ZNF157P51786 506 aaPredicted RBP25.33■■□□□ 1.65
SEC13-217ENST00000482647 PI4K2BQ8TCG2 481 aa25.33■■□□□ 1.65
SEC13-217ENST00000482647 CCDC102AQ96A19 550 aa25.33■■□□□ 1.65
SEC13-217ENST00000482647 STAP2Q9UGK3 403 aa25.33■■□□□ 1.65
SEC13-217ENST00000482647 SALL3Q9BXA9 1300 aa25.33■■□□□ 1.64
SEC13-217ENST00000482647 WDR33Q9C0J8 1336 aaKnown RBP25.33■■□□□ 1.64
SEC13-217ENST00000482647 RPAP1Q9BWH6 1393 aaPredicted RBP25.32■■□□□ 1.64
SEC13-217ENST00000482647 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
SEC13-217ENST00000482647 GRM1Q13255 1194 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 PICALMQ13492 652 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 MAP3K11Q16584 847 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 ZSCAN25Q6NSZ9 544 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 ZFPM1Q8IX07 1006 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 MIGA1Q8NAN2 632 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 ZNF532Q9HCE3 1301 aa25.32■■□□□ 1.64
SEC13-217ENST00000482647 USP2O75604 605 aaPredicted RBP25.31■■□□□ 1.64
SEC13-217ENST00000482647 LDLRAD1Q5T700 205 aa25.31■■□□□ 1.64
SEC13-217ENST00000482647 DDX4Q9NQI0 724 aaKnown RBP25.31■■□□□ 1.64
SEC13-217ENST00000482647 FZD1Q9UP38 647 aa25.31■■□□□ 1.64
SEC13-217ENST00000482647 PAPPA2Q9BXP8 1791 aa25.31■■□□□ 1.64
SEC13-217ENST00000482647 SSC5DA1L4H1 1573 aa25.31■■□□□ 1.64
SEC13-217ENST00000482647 RFX7Q2KHR2 1363 aa25.31■■□□□ 1.64
SEC13-217ENST00000482647 UNCXA6NJT0 531 aa25.3■■□□□ 1.64
SEC13-217ENST00000482647 PDE1AP54750 535 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms