RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 DHX58Q96C10 678 aa10.53□□□□□ -0.72
CALD1-220ENST00000482470 NLRP3Q96P20 1036 aa10.53□□□□□ -0.72
CALD1-220ENST00000482470 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
CALD1-220ENST00000482470 CNNM2Q9H8M5 875 aa10.53□□□□□ -0.72
CALD1-220ENST00000482470 CARMIL3Q8ND23 1372 aa10.53□□□□□ -0.72
CALD1-220ENST00000482470 KDM6AO15550 1401 aaPredicted RBP10.53□□□□□ -0.72
CALD1-220ENST00000482470 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.72
CALD1-220ENST00000482470 ZBTB9Q96C00 473 aa10.52□□□□□ -0.72
CALD1-220ENST00000482470 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.72
CALD1-220ENST00000482470 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.72
CALD1-220ENST00000482470 BTBD18B2RXH4 712 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
CALD1-220ENST00000482470 SLIT1O75093 1534 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 MED23Q9ULK4 1368 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 ELP1O95163 1332 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 CRKLP46109 303 aaKnown RBP10.52□□□□□ -0.73
CALD1-220ENST00000482470 SUSD4Q5VX71 490 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 KIF18AQ8NI77 898 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 ISCA1Q9BUE6 129 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
CALD1-220ENST00000482470 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 URI1O94763 535 aaPredicted RBP10.52□□□□□ -0.73
CALD1-220ENST00000482470 ADD2P35612 726 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 SIK1P57059 783 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 STAMQ92783 540 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 SMARCE1Q969G3 411 aa10.52□□□□□ -0.73
CALD1-220ENST00000482470 CBFA2T2O43439 604 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 PFKFB1P16118 471 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 ADALQ6DHV7 355 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 ZNF771Q7L3S4 317 aaPredicted RBP10.51□□□□□ -0.73
CALD1-220ENST00000482470 PPFIBP1Q86W92 1011 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 TMEM87BQ96K49 555 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
CALD1-220ENST00000482470 RCOR1Q9UKL0 485 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 CEP131Q9UPN4 1083 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 MON2Q7Z3U7 1717 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 PATL2C9JE40 543 aaKnown RBP10.51□□□□□ -0.73
CALD1-220ENST00000482470 TXLNAP40222 546 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 PNOCQ13519 176 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 FILIP1LQ4L180 1135 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 MCM9Q9NXL9 1143 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 GNPATO15228 680 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 POLR2DO15514 142 aaKnown RBP10.51□□□□□ -0.73
CALD1-220ENST00000482470 CHRNDQ07001 517 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 RASGRF1Q13972 1273 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 ZNF174Q15697 407 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 APOA5Q6Q788 366 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
CALD1-220ENST00000482470 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 SNW1Q13573 536 aaKnown RBP10.5□□□□□ -0.73
CALD1-220ENST00000482470 ZNF827Q17R98 1081 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 DPCR1Q3MIW9 517 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 USPL1Q5W0Q7 1092 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 TBC1D10CQ8IV04 446 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 ZNF444Q8N0Y2 327 aaPredicted RBP10.5□□□□□ -0.73
CALD1-220ENST00000482470 GOLPH3LQ9H4A5 285 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 ZSWIM5Q9P217 1185 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 KCNH3Q9ULD8 1083 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 FAM47AQ5JRC9 791 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 PLIN2Q99541 437 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 MROH5Q6ZUA9 1318 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 ATL3Q6DD88 541 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 LCORLQ8N3X6 602 aa10.5□□□□□ -0.73
CALD1-220ENST00000482470 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
CALD1-220ENST00000482470 CACTINQ8WUQ7 758 aaKnown RBP10.5□□□□□ -0.73
CALD1-220ENST00000482470 XPO4Q9C0E2 1151 aaKnown RBP10.5□□□□□ -0.73
CALD1-220ENST00000482470 RFC4P35249 363 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 GSDMDP57764 484 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 TSGA10IPQ3SY00 556 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 CYB5R4Q7L1T6 521 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 TMTC2Q8N394 836 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 LINC00301Q8NCQ3 95 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 RGPD8O14715 1765 aaPredicted RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 TRIM75PA6NK02 468 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 USP17L21D6R901 530 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 F8W031 263 aaPredicted RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 CRNKL1Q9BZJ0 848 aaKnown RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 CTDNEP1O95476 244 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 CYP19A1P11511 503 aaPredicted RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 IL6STP40189 918 aaPredicted RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 UBE3CQ15386 1083 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 PARP10Q53GL7 1025 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
CALD1-220ENST00000482470 DNAI1Q9UI46 699 aa10.49□□□□□ -0.73
CALD1-220ENST00000482470 VWA3AA6NCI4 1184 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 YEATS4O95619 227 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 GNAT2P19087 354 aa10.48□□□□□ -0.73
CALD1-220ENST00000482470 DYNLL1P63167 89 aaKnown RBP10.48□□□□□ -0.73
CALD1-220ENST00000482470 EXOSC10Q01780 885 aaKnown RBP10.48□□□□□ -0.73
CALD1-220ENST00000482470 IKQ13123 557 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms