RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 C2orf69Q8N8R5 385 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 MXD3Q9BW11 206 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 GBA2Q9HCG7 927 aaPredicted RBP11.48□□□□□ -0.57
HLA-B-253ENST00000481849 SCAF8Q9UPN6 1271 aaKnown RBP11.48□□□□□ -0.57
HLA-B-253ENST00000481849 IL16Q14005 1332 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
HLA-B-253ENST00000481849 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 GCKRQ14397 625 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 HHIPL1Q96JK4 782 aa11.47□□□□□ -0.57
HLA-B-253ENST00000481849 BSDC1Q9NW68 430 aaPredicted RBP11.47□□□□□ -0.57
HLA-B-253ENST00000481849 OATP04181 439 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 ITGA6P23229 1130 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 CCT4P50991 539 aaKnown RBP11.46□□□□□ -0.57
HLA-B-253ENST00000481849 BRPF1P55201 1214 aaPredicted RBP11.46□□□□□ -0.57
HLA-B-253ENST00000481849 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
HLA-B-253ENST00000481849 RGMBQ6NW40 437 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 PODNQ7Z5L7 613 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 FAM9BQ8IZU0 186 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 AGBL3Q8NEM8 1001 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 DNAAF4Q8WXU2 420 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 CDCA5Q96FF9 252 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 MYOZ2Q9NPC6 264 aa11.46□□□□□ -0.57
HLA-B-253ENST00000481849 MED23Q9ULK4 1368 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 F6X3S4 739 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 VAMP4O75379 141 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 CFHP08603 1231 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 KLRK1P26718 216 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
HLA-B-253ENST00000481849 ZNF157P51786 506 aaPredicted RBP11.45□□□□□ -0.58
HLA-B-253ENST00000481849 NOGQ13253 232 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 TRAF7Q6Q0C0 670 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 GMLQ99445 158 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 MYH16Q9H6N6 1097 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
HLA-B-253ENST00000481849 MUC3AQ02505 3323 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 SNAP23O00161 211 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
HLA-B-253ENST00000481849 KCNJ4P48050 445 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 CASP7P55210 303 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
HLA-B-253ENST00000481849 DACT2Q5SW24 774 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 PRAMEF18Q5VWM3 479 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 LINS1Q8NG48 757 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 FAM122AQ96E09 287 aa11.44□□□□□ -0.58
HLA-B-253ENST00000481849 ZNF804BA4D1E1 1349 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 FAM155AB1AL88 458 aaPredicted RBP11.43□□□□□ -0.58
HLA-B-253ENST00000481849 CA12O43570 354 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 TAF5LO75529 589 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 SASH1O94885 1247 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 CHRNDQ07001 517 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 HIC1Q14526 733 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 NBPF9Q3BBW0 867 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 MOB2Q70IA6 237 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 HELBQ8NG08 1087 aaPredicted RBP11.43□□□□□ -0.58
HLA-B-253ENST00000481849 CCDC102AQ96A19 550 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 PLA2G12BQ9BX93 195 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 ANKRD2Q9GZV1 360 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 COA1Q9GZY4 146 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 LEMD3Q9Y2U8 911 aa11.43□□□□□ -0.58
HLA-B-253ENST00000481849 ANKRD18BA2A2Z9 1011 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
HLA-B-253ENST00000481849 CSF1RP07333 972 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 GTF2IP78347 998 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 RAPGEFL1Q9UHV5 662 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
HLA-B-253ENST00000481849 TRPM7Q96QT4 1865 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 TESPA1A2RU30 521 aaPredicted RBP11.41□□□□□ -0.58
HLA-B-253ENST00000481849 PLIN1O60240 522 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 FOXO4P98177 505 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 IFIT5Q13325 482 aaKnown RBP11.41□□□□□ -0.58
HLA-B-253ENST00000481849 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
HLA-B-253ENST00000481849 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 STRIP1Q5VSL9 837 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 TTLL5Q6EMB2 1281 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 SLC4A10Q6U841 1118 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 ZNF594Q96JF6 807 aaPredicted RBP11.41□□□□□ -0.58
HLA-B-253ENST00000481849 ZNF609O15014 1411 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
HLA-B-253ENST00000481849 UBE2Q2LH0YL09 131 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 WNT10BO00744 389 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 LCE2BO14633 110 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 TRPA1O75762 1119 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 SLC10A3P09131 477 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 PRKG1Q13976 671 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 EPHA10Q5JZY3 1008 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 RNF186Q9NXI6 227 aa11.4□□□□□ -0.58
HLA-B-253ENST00000481849 JAG2Q9Y219 1238 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms