RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 ZFYP08048 801 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-211ENST00000481804 ADKP55263 362 aaKnown RBP16.48■□□□□ 0.23
CCDC78-211ENST00000481804 MB21D2Q8IYB1 491 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-211ENST00000481804 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
CCDC78-211ENST00000481804 KCNH3Q9ULD8 1083 aa16.48■□□□□ 0.23
CCDC78-211ENST00000481804 GOLGA6L9A6NEM1 432 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 GPAA1O43292 621 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 ZRANB2O95218 330 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC78-211ENST00000481804 ADORA1P30542 326 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 CASP7P55210 303 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 LONRF3Q496Y0 759 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 CCDC12Q8WUD4 166 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-211ENST00000481804 WDR24Q96S15 920 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 LAMA4Q16363 1823 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 H7C1W4 665 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 ANTXR2P58335 489 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 DESI2Q9BSY9 194 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 PUS7LQ9H0K6 701 aaKnown RBP16.47■□□□□ 0.23
CCDC78-211ENST00000481804 HSD3B7Q9H2F3 369 aa16.47■□□□□ 0.23
CCDC78-211ENST00000481804 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-211ENST00000481804 VWA3AA6NCI4 1184 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 SMC1AQ14683 1233 aaKnown RBP16.46■□□□□ 0.23
CCDC78-211ENST00000481804 FCHSD1Q86WN1 690 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 APPBP2Q92624 585 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 TMEM51Q9NW97 253 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 ANGEL1Q9UNK9 670 aaKnown RBP16.46■□□□□ 0.23
CCDC78-211ENST00000481804 VGLL3A8MV65 326 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
CCDC78-211ENST00000481804 ZAP70P43403 619 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 TXLNBQ8N3L3 684 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 GPR161Q8N6U8 529 aaKnown RBP16.46■□□□□ 0.23
CCDC78-211ENST00000481804 ZBTB9Q96C00 473 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 XAGE2Q96GT9 111 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 NFE2L3Q9Y4A8 694 aa16.46■□□□□ 0.23
CCDC78-211ENST00000481804 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 TRMT44Q8IYL2 757 aaKnown RBP16.45■□□□□ 0.22
CCDC78-211ENST00000481804 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 ABCC6O95255 1503 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-211ENST00000481804 PPP6R2O75170 966 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 CC2D1AQ6P1N0 951 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-211ENST00000481804 KRBA2Q6ZNG9 492 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
CCDC78-211ENST00000481804 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 TOGARAM2Q6ZUX3 1019 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 FBXL16Q8N461 479 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 GOLGA1Q92805 767 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
CCDC78-211ENST00000481804 FANCGO15287 622 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 SPECC1LQ69YQ0 1117 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.226e-8■■■■■ 46.2
CCDC78-211ENST00000481804 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 GOLGA8AA7E2F4 631 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 FOXN1O15353 648 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 CUTAO60888 179 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 ST5P78524 1137 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 SAFBQ15424 915 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC78-211ENST00000481804 SLC26A6Q9BXS9 759 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 LZTFL1Q9NQ48 299 aa16.44■□□□□ 0.22
CCDC78-211ENST00000481804 ZBTB43O43298 467 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
CCDC78-211ENST00000481804 GTF2E1P29083 439 aaPredicted RBP16.43■□□□□ 0.22
CCDC78-211ENST00000481804 SCARF1Q14162 830 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 RESP18Q5W5W9 173 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 CPLX3Q8WVH0 158 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 PARD6BQ9BYG5 372 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 HPSEQ9Y251 543 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 B4E1Z4 1266 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 STX10O60499 249 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 PDE4BQ07343 736 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 TICAM2Q86XR7 235 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
CCDC78-211ENST00000481804 SMARCE1Q969G3 411 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 DHX58Q96C10 678 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 AK7Q96M32 723 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 DACH1Q9UI36 760 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 DENND2AQ9ULE3 1009 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 ATP8B1O43520 1251 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 SASH3O75995 380 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 A1BGP04217 495 aa16.43■□□□□ 0.22
CCDC78-211ENST00000481804 MYO1BO43795 1136 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 LMAN1P49257 510 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 CDC27P30260 824 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 GYS2P54840 703 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
CCDC78-211ENST00000481804 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
CCDC78-211ENST00000481804 MRFAP1Q9Y605 127 aa16.42■□□□□ 0.22
CCDC78-211ENST00000481804 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms