RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 PRMT6Q96LA8 375 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-210ENST00000481508 ZIC5Q96T25 663 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 TLL2Q9Y6L7 1015 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
SSBP1-210ENST00000481508 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 IGHDP01880 384 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
SSBP1-210ENST00000481508 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 MYH7P12883 1935 aa12.98□□□□□ -0.33
SSBP1-210ENST00000481508 CLRN2A0PK11 232 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 UQCRFS1P1P0C7P4 283 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 ZAP70P43403 619 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
SSBP1-210ENST00000481508 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
SSBP1-210ENST00000481508 MTMR14Q8NCE2 650 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 PIH1D3Q9NQM4 214 aaKnown RBP12.97□□□□□ -0.33
SSBP1-210ENST00000481508 ABCF2Q9UG63 623 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
SSBP1-210ENST00000481508 CENPFP49454 3210 aa12.96□□□□□ -0.33
SSBP1-210ENST00000481508 CYP2E1P05181 493 aaPredicted RBP12.96□□□□□ -0.33
SSBP1-210ENST00000481508 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
SSBP1-210ENST00000481508 CCDC158Q5M9N0 1113 aa12.96□□□□□ -0.33
SSBP1-210ENST00000481508 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
SSBP1-210ENST00000481508 OTUD7AQ8TE49 926 aaPredicted RBP12.96□□□□□ -0.33
SSBP1-210ENST00000481508 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
SSBP1-210ENST00000481508 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.33
SSBP1-210ENST00000481508 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
SSBP1-210ENST00000481508 DAGLAQ9Y4D2 1042 aa12.96□□□□□ -0.33
SSBP1-210ENST00000481508 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 BRCA2P51587 3418 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
SSBP1-210ENST00000481508 IFIT2P09913 472 aaKnown RBP12.95□□□□□ -0.34
SSBP1-210ENST00000481508 MAP2K2P36507 400 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 CACNB3P54284 484 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 APOBEC3HQ6NTF7 200 aaKnown RBP12.95□□□□□ -0.34
SSBP1-210ENST00000481508 CDC37L1Q7L3B6 337 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 DCPSQ96C86 337 aaKnown RBP12.95□□□□□ -0.34
SSBP1-210ENST00000481508 EDC3Q96F86 508 aaKnown RBP12.95□□□□□ -0.34
SSBP1-210ENST00000481508 ZNF70Q9UC06 446 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-210ENST00000481508 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
SSBP1-210ENST00000481508 OTOFQ9HC10 1997 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 HTTP42858 3142 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 MMP14P50281 582 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
SSBP1-210ENST00000481508 MECOMQ03112 1051 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 LHX8Q68G74 356 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 CDCA5Q96FF9 252 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
SSBP1-210ENST00000481508 GAKO14976 1311 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 MAST3O60307 1309 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 CA12O43570 354 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 CELF2O95319 508 aaKnown RBP12.93□□□□□ -0.34
SSBP1-210ENST00000481508 AAMPQ13685 434 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 ERICH6Q7L0X2 663 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 ADGRA1Q86SQ6 560 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 SAPCD2Q86UD0 394 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 SULF1Q8IWU6 871 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 NSUN4Q96CB9 384 aaKnown RBP12.93□□□□□ -0.34
SSBP1-210ENST00000481508 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 AK9Q5TCS8 1911 aa12.93□□□□□ -0.34
SSBP1-210ENST00000481508 SALL3Q9BXA9 1300 aa12.92□□□□□ -0.34
SSBP1-210ENST00000481508 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
SSBP1-210ENST00000481508 DZIP1Q86YF9 867 aaKnown RBP12.92□□□□□ -0.34
SSBP1-210ENST00000481508 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
SSBP1-210ENST00000481508 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
SSBP1-210ENST00000481508 MRIQ9BWK5 157 aa12.92□□□□□ -0.34
SSBP1-210ENST00000481508 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
SSBP1-210ENST00000481508 RAI14Q9P0K7 980 aa12.92□□□□□ -0.34
SSBP1-210ENST00000481508 RFX7Q2KHR2 1363 aa12.92□□□□□ -0.34
SSBP1-210ENST00000481508 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 SIPA1L1O43166 1804 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 KIAA0100Q14667 2235 aaKnown RBP12.91□□□□□ -0.34
SSBP1-210ENST00000481508 TCP10L2B9ZVM9 353 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 CHGBP05060 677 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 APOBEC3FQ8IUX4 373 aaKnown RBP12.91□□□□□ -0.34
SSBP1-210ENST00000481508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
SSBP1-210ENST00000481508 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
SSBP1-210ENST00000481508 FZD1Q9UP38 647 aa12.91□□□□□ -0.34
SSBP1-210ENST00000481508 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms