RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
PDCD4-206ENST00000481353 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
PDCD4-206ENST00000481353 RBSNQ9H1K0 784 aa11.32□□□□□ -0.6
PDCD4-206ENST00000481353 CLEC4MQ9H2X3 399 aaPredicted RBP11.32□□□□□ -0.6
PDCD4-206ENST00000481353 GPN3Q9UHW5 284 aaPredicted RBP11.32□□□□□ -0.6
PDCD4-206ENST00000481353 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
PDCD4-206ENST00000481353 MLLT1Q03111 559 aaPredicted RBP11.31□□□□□ -0.6
PDCD4-206ENST00000481353 PPP2R3AQ06190 1150 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 GPAT2Q6NUI2 795 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 NKD1Q969G9 470 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 DNAJB12Q9NXW2 375 aaKnown RBP11.31□□□□□ -0.6
PDCD4-206ENST00000481353 SAMM50Q9Y512 469 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 BICRAQ9NZM4 1560 aa11.31□□□□□ -0.6
PDCD4-206ENST00000481353 KRBA1A5PL33 1030 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 KLF4O43474 513 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 SMNDC1O75940 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDCD4-206ENST00000481353 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
PDCD4-206ENST00000481353 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 ANKS3Q6ZW76 656 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 NLGN1Q8N2Q7 840 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 SIRPGQ9P1W8 387 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 STARD13Q9Y3M8 1113 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
PDCD4-206ENST00000481353 ANKRD62A6NC57 917 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 SIN3BO75182 1162 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 RAB33AQ14088 237 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 GATAD2BQ8WXI9 593 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 SRRTQ9BXP5 876 aaKnown RBP11.29□□□□□ -0.6
PDCD4-206ENST00000481353 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 CYP8B1Q9UNU6 501 aa11.29□□□□□ -0.6
PDCD4-206ENST00000481353 ARHGAP35Q9NRY4 1499 aa11.28□□□□□ -0.6
PDCD4-206ENST00000481353 B3GALT4O96024 378 aa11.28□□□□□ -0.6
PDCD4-206ENST00000481353 EGFLAMQ63HQ2 1017 aa11.28□□□□□ -0.6
PDCD4-206ENST00000481353 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
PDCD4-206ENST00000481353 JAZF1Q86VZ6 243 aa11.28□□□□□ -0.6
PDCD4-206ENST00000481353 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
PDCD4-206ENST00000481353 MIR1-1HGQ9H1L0 117 aa11.28□□□□□ -0.6
PDCD4-206ENST00000481353 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
PDCD4-206ENST00000481353 FAM221AA4D161 298 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 F13A1P00488 732 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
PDCD4-206ENST00000481353 BMP6P22004 513 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 NME2P22392 152 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 MPP2Q14168 576 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 CEP135Q66GS9 1140 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 TNFRSF25Q93038 417 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 SHDQ96IW2 340 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 SOX13Q9UN79 622 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 TIAM1Q13009 1591 aa11.27□□□□□ -0.61
PDCD4-206ENST00000481353 LMNB1P20700 586 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 PCDH1Q08174 1060 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-206ENST00000481353 BNC2Q6ZN30 1099 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-206ENST00000481353 ZNF662Q6ZS27 426 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 VN1R5Q7Z5H4 357 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 TRIM55Q9BYV6 548 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 ADAM19Q9H013 955 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 IGFLR1Q9H665 355 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 MKL2Q9ULH7 1088 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 PCDHB5Q9Y5E4 795 aa11.26□□□□□ -0.61
PDCD4-206ENST00000481353 CDK11BP21127 795 aaKnown RBP11.25□□□□□ -0.61
PDCD4-206ENST00000481353 SEZ6Q53EL9 994 aa11.25□□□□□ -0.61
PDCD4-206ENST00000481353 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
PDCD4-206ENST00000481353 ANAPC16Q96DE5 110 aa11.25□□□□□ -0.61
PDCD4-206ENST00000481353 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
PDCD4-206ENST00000481353 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 ELOA3DA6NLF2 546 aaPredicted RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 PTPRAP18433 802 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 ZNF157P51786 506 aaPredicted RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 LRRC14Q15048 493 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 ZNF423Q2M1K9 1284 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 ELOA3BQ3SY89 546 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 SCARA3Q6AZY7 606 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 LRP10Q7Z4F1 713 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 FAM35AQ86V20 835 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 ELOA3Q8NG57 546 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 FBXO27Q8NI29 283 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 HNRNPLLQ8WVV9 542 aaKnown RBP11.24□□□□□ -0.61
PDCD4-206ENST00000481353 PLD4Q96BZ4 506 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
PDCD4-206ENST00000481353 CILPO75339 1184 aa11.23□□□□□ -0.61
PDCD4-206ENST00000481353 ALBP02768 609 aa11.23□□□□□ -0.61
PDCD4-206ENST00000481353 SULF2Q8IWU5 870 aa11.23□□□□□ -0.61
PDCD4-206ENST00000481353 REXO1Q8N1G1 1221 aaKnown RBP11.23□□□□□ -0.61
PDCD4-206ENST00000481353 SLC6A14Q9UN76 642 aa11.23□□□□□ -0.61
PDCD4-206ENST00000481353 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
PDCD4-206ENST00000481353 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 PROCP04070 461 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms