RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 PHKA1P46020 1223 aa15.02■□□□□ -0
SQSTM1-207ENST00000481335 ERO1BQ86YB8 467 aa15.02■□□□□ -0
SQSTM1-207ENST00000481335 CDAN1Q8IWY9 1227 aa15.02■□□□□ -0
SQSTM1-207ENST00000481335 MS4A4AQ96JQ5 239 aa15.02■□□□□ -0
SQSTM1-207ENST00000481335 GAKO14976 1311 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 A0A1B0GUL7 405 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 BCAR3O75815 825 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 CACNB3P54284 484 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 SPTY2D1Q68D10 685 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 FRAT1Q92837 279 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 ERO1AQ96HE7 468 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 WRNIP1Q96S55 665 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 ZNF341Q9BYN7 854 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 HPS5Q9UPZ3 1129 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 HTTP42858 3142 aa15.01□□□□□ -0.01
SQSTM1-207ENST00000481335 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
SQSTM1-207ENST00000481335 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
SQSTM1-207ENST00000481335 RASGRF1Q13972 1273 aa15□□□□□ -0.01
SQSTM1-207ENST00000481335 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
SQSTM1-207ENST00000481335 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
SQSTM1-207ENST00000481335 CDC42EP5Q6NZY7 148 aa15□□□□□ -0.01
SQSTM1-207ENST00000481335 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
SQSTM1-207ENST00000481335 SNCAIPQ9Y6H5 919 aa15□□□□□ -0.01
SQSTM1-207ENST00000481335 RFX7Q2KHR2 1363 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 MAST2Q6P0Q8 1798 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 RBBP6Q7Z6E9 1792 aaKnown RBP14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 CCL15-CCL14A0A0B4J2E2 113 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 IGSF3O75054 1194 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 MAP4K4O95819 1239 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 CETPP11597 493 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 ADORA1P30542 326 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 PPATQ06203 517 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 TFCP2Q12800 502 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 CRHR2Q13324 411 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 PPIL2Q13356 520 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 CCL15Q16663 113 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 DZIP1Q86YF9 867 aaKnown RBP14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 XAGE2Q96GT9 111 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 PTPN18Q99952 460 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 R3HDMLQ9H3Y0 253 aa14.99□□□□□ -0.01
SQSTM1-207ENST00000481335 TNRC18O15417 2968 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 ENTPD3O75355 529 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 TIMM10P62072 90 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 G3BP1Q13283 466 aaKnown RBP eCLIP14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 SNAPC2Q13487 334 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 ARHGEF6Q15052 776 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 NOL9Q5SY16 702 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 FTSJ3Q8IY81 847 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 BRI3BPQ8WY22 251 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 ZFYVE28Q9HCC9 887 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 GPR108Q9NPR9 543 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 ZNF112Q9UJU3 913 aa14.98□□□□□ -0.01
SQSTM1-207ENST00000481335 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 ARID4AP29374 1257 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 SP3Q02447 781 aa14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 POLA2Q14181 598 aa14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 MIER1Q8N108 512 aa14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 TMEM57Q8N5G2 664 aa14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 USP40Q9NVE5 1235 aa14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-207ENST00000481335 MROH7-TTC4A0A0A0MT08 1334 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 PNMA6EA0A0J9YXQ4 647 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 UQCRFS1P1P0C7P4 283 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 CENPFP49454 3210 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 NFIAQ12857 509 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 DOCK1Q14185 1865 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 TAF1CQ15572 869 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 OTOP1Q7RTM1 612 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 SSH3Q8TE77 659 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 FAM198AQ9UFP1 575 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 ABCF2Q9UG63 623 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 TRIM17Q9Y577 477 aa14.96□□□□□ -0.01
SQSTM1-207ENST00000481335 ATRNL1Q5VV63 1379 aa14.96□□□□□ -0.02
SQSTM1-207ENST00000481335 IRF6O14896 467 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 GSTO1P78417 241 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 TCP10Q12799 353 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 GORABQ5T7V8 394 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 SPATA5Q8NB90 893 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 ZKSCAN4Q969J2 545 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 NEUROD6Q96NK8 337 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 KCNH4Q9UQ05 1017 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 TNNQ9UQP3 1299 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 PTPRFP10586 1907 aa14.95□□□□□ -0.02
SQSTM1-207ENST00000481335 GPR75-ASB3A0A0A6YYF3 556 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 TLR2O60603 784 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 LDHCP07864 332 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 RGS3P49796 1198 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 SOX10P56693 466 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 MIGA2Q7L4E1 593 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
SQSTM1-207ENST00000481335 EFCC1Q9HA90 598 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms