RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MCF2L2Q86YR7 1114 aa8.16□□□□□ -1.1
UPF3A-207ENST00000481131 FBXO27Q8NI29 283 aa8.16□□□□□ -1.1
UPF3A-207ENST00000481131 TRIM11Q96F44 468 aa8.16□□□□□ -1.1
UPF3A-207ENST00000481131 NT5C1AQ9BXI3 368 aa8.16□□□□□ -1.1
UPF3A-207ENST00000481131 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
UPF3A-207ENST00000481131 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
UPF3A-207ENST00000481131 MSTNO14793 375 aa8.15□□□□□ -1.1
UPF3A-207ENST00000481131 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
UPF3A-207ENST00000481131 LLGL2Q6P1M3 1020 aa8.15□□□□□ -1.1
UPF3A-207ENST00000481131 GALNT11Q8NCW6 608 aa8.15□□□□□ -1.1
UPF3A-207ENST00000481131 WNT8BQ93098 351 aa8.15□□□□□ -1.1
UPF3A-207ENST00000481131 FAM221AA4D161 298 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
UPF3A-207ENST00000481131 CTSBP07858 339 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
UPF3A-207ENST00000481131 AP3B2Q13367 1082 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 CCDC84Q86UT8 332 aaPredicted RBP8.14□□□□□ -1.11
UPF3A-207ENST00000481131 UBXN4Q92575 508 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
UPF3A-207ENST00000481131 KLHDC7BQ96G42 594 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 CBX8Q9HC52 389 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 OSGEPQ9NPF4 335 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 CACNA2D2Q9NY47 1150 aa8.14□□□□□ -1.11
UPF3A-207ENST00000481131 SELPP16109 830 aa8.13□□□□□ -1.11
UPF3A-207ENST00000481131 DMRTC2Q8IXT2 367 aaPredicted RBP8.13□□□□□ -1.11
UPF3A-207ENST00000481131 DDX54Q8TDD1 881 aaKnown RBP8.13□□□□□ -1.11
UPF3A-207ENST00000481131 GATAD2BQ8WXI9 593 aa8.13□□□□□ -1.11
UPF3A-207ENST00000481131 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
UPF3A-207ENST00000481131 EMILIN2Q9BXX0 1053 aa8.13□□□□□ -1.11
UPF3A-207ENST00000481131 LRRC3Q9BY71 257 aa8.13□□□□□ -1.11
UPF3A-207ENST00000481131 MIR1-1HGQ9H1L0 117 aa8.13□□□□□ -1.11
UPF3A-207ENST00000481131 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
UPF3A-207ENST00000481131 TLR3O15455 904 aaKnown RBP8.12□□□□□ -1.11
UPF3A-207ENST00000481131 ADAM11O75078 769 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 CILPO75339 1184 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 ATP2B1P20020 1258 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 APOBRQ0VD83 1088 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 LRRC14Q15048 493 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
UPF3A-207ENST00000481131 FAM117BQ6P1L5 589 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 VPS37DQ86XT2 251 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 SEC16BQ96JE7 1060 aa8.12□□□□□ -1.11
UPF3A-207ENST00000481131 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.12□□□□□ -1.112e-8■■■■■ 40.2
UPF3A-207ENST00000481131 ZC3H12CQ9C0D7 883 aaKnown RBP8.12□□□□□ -1.11
UPF3A-207ENST00000481131 GNB5O14775 395 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 ADAM23O75077 832 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 MAOBP27338 520 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 SOX9P48436 509 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 NASPP49321 788 aaPredicted RBP8.11□□□□□ -1.11
UPF3A-207ENST00000481131 POU4F3Q15319 338 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
UPF3A-207ENST00000481131 SLITRK4Q8IW52 837 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 CCDC86Q9H6F5 360 aaKnown RBP8.11□□□□□ -1.11
UPF3A-207ENST00000481131 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
UPF3A-207ENST00000481131 DDX3YO15523 660 aaKnown RBP8.1□□□□□ -1.11
UPF3A-207ENST00000481131 TRIM37O94972 964 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 DLGAP3O95886 979 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 LMNB1P20700 586 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
UPF3A-207ENST00000481131 CDK8P49336 464 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 ARL4DP49703 201 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 NLRP12P59046 1061 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 FOXD4L6Q3SYB3 417 aaPredicted RBP8.1□□□□□ -1.11
UPF3A-207ENST00000481131 SEZ6Q53EL9 994 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 FOXD4L3Q6VB84 417 aaPredicted RBP8.1□□□□□ -1.11
UPF3A-207ENST00000481131 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 KCNB2Q92953 911 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 NKD1Q969G9 470 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 SPATA32Q96LK8 384 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
UPF3A-207ENST00000481131 ZNF862O60290 1169 aa8.09□□□□□ -1.11
UPF3A-207ENST00000481131 CYP11A1P05108 521 aa8.09□□□□□ -1.11
UPF3A-207ENST00000481131 SCARA3Q6AZY7 606 aa8.09□□□□□ -1.11
UPF3A-207ENST00000481131 GPBAR1Q8TDU6 330 aa8.09□□□□□ -1.11
UPF3A-207ENST00000481131 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
UPF3A-207ENST00000481131 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
UPF3A-207ENST00000481131 CORO1BQ9BR76 489 aa8.09□□□□□ -1.11
UPF3A-207ENST00000481131 PLVAPQ9BX97 442 aa8.09□□□□□ -1.11
UPF3A-207ENST00000481131 LOC100289279A0A1B0GTE1 492 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 CHRNA4P43681 627 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 MPP2Q14168 576 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
UPF3A-207ENST00000481131 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
UPF3A-207ENST00000481131 CD68P34810 354 aaPredicted RBP8.07□□□□□ -1.12
UPF3A-207ENST00000481131 COL9A2Q14055 689 aaPredicted RBP8.07□□□□□ -1.12
UPF3A-207ENST00000481131 REC114Q7Z4M0 266 aa8.07□□□□□ -1.12
UPF3A-207ENST00000481131 BRMS1Q9HCU9 246 aa8.07□□□□□ -1.12
UPF3A-207ENST00000481131 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
UPF3A-207ENST00000481131 PPT2Q9UMR5 302 aa8.07□□□□□ -1.12
UPF3A-207ENST00000481131 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
UPF3A-207ENST00000481131 A0A0A0MRY4 1105 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 C1QTNF9BB2RNN3 333 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 LIG1P18858 919 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 RPL6Q02878 288 aaKnown RBP8.06□□□□□ -1.12
UPF3A-207ENST00000481131 RBL2Q08999 1139 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 CWF19L2Q2TBE0 894 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms