RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 AKTIPQ9H8T0 292 aa8.89□□□□□ -0.99
VPS50-215ENST00000480943 C14orf93Q9H972 538 aaKnown RBP8.89□□□□□ -0.99
VPS50-215ENST00000480943 RAXQ9Y2V3 346 aa8.89□□□□□ -0.99
VPS50-215ENST00000480943 IGFBP4P22692 258 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 PSAPL1Q6NUJ1 521 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 ALDH16A1Q8IZ83 802 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 DCAF11Q8TEB1 546 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
VPS50-215ENST00000480943 NGLY1Q96IV0 654 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 HSH2DQ96JZ2 352 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 EFCC1Q9HA90 598 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 PXDNQ92626 1479 aa8.88□□□□□ -0.99
VPS50-215ENST00000480943 SAFB2Q14151 953 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS50-215ENST00000480943 DTX1Q86Y01 620 aa8.87□□□□□ -0.99
VPS50-215ENST00000480943 FAM200AQ8TCP9 573 aa8.87□□□□□ -0.99
VPS50-215ENST00000480943 NOVA2Q9UNW9 492 aaKnown RBP8.87□□□□□ -0.99
VPS50-215ENST00000480943 QRICH2Q9H0J4 1663 aa8.86□□□□□ -0.99
VPS50-215ENST00000480943 SUSD3Q96L08 255 aa8.86□□□□□ -0.99
VPS50-215ENST00000480943 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
VPS50-215ENST00000480943 TRPM3Q9HCF6 1732 aaPredicted RBP8.85□□□□□ -0.99
VPS50-215ENST00000480943 TOPAZ1Q8N9V7 1692 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 TRPM1Q7Z4N2 1603 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 KCNQ4P56696 695 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 HIF1AQ16665 826 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 BHMTQ93088 406 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 CCDC97Q96F63 343 aaPredicted RBP8.85□□□□□ -0.99
VPS50-215ENST00000480943 CEP63Q96MT8 703 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 POGKQ9P215 609 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 STOML1Q9UBI4 398 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 PLCH1Q4KWH8 1693 aa8.85□□□□□ -0.99
VPS50-215ENST00000480943 NPHP3Q7Z494 1330 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 ADAMTS4O75173 837 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 XPCQ01831 940 aaPredicted RBP8.84□□□□□ -0.99
VPS50-215ENST00000480943 RTN1Q16799 776 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 ZNF280CQ8ND82 737 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.84□□□□□ -0.99
VPS50-215ENST00000480943 IGFLR1Q9H665 355 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 TRAK1Q9UPV9 953 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 ALS2Q96Q42 1657 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 TULP4Q9NRJ4 1543 aa8.84□□□□□ -0.99
VPS50-215ENST00000480943 AFF2P51816 1311 aa8.83□□□□□ -1
VPS50-215ENST00000480943 CRYBG1Q9Y4K1 1723 aa8.83□□□□□ -1
VPS50-215ENST00000480943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.83□□□□□ -1
VPS50-215ENST00000480943 FOXO3O43524 673 aa8.83□□□□□ -1
VPS50-215ENST00000480943 WEE1P30291 646 aa8.83□□□□□ -1
VPS50-215ENST00000480943 TYRO3Q06418 890 aa8.83□□□□□ -1
VPS50-215ENST00000480943 ZNF772Q68DY9 489 aaPredicted RBP8.83□□□□□ -1
VPS50-215ENST00000480943 C8orf37Q96NL8 207 aa8.83□□□□□ -1
VPS50-215ENST00000480943 ANKARQ7Z5J8 1434 aa8.82□□□□□ -1
VPS50-215ENST00000480943 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
VPS50-215ENST00000480943 WFDC8Q8IUA0 241 aa8.82□□□□□ -1
VPS50-215ENST00000480943 TMEM130Q8N3G9 435 aa8.82□□□□□ -1
VPS50-215ENST00000480943 VTI1AQ96AJ9 217 aa8.82□□□□□ -1
VPS50-215ENST00000480943 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
VPS50-215ENST00000480943 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
VPS50-215ENST00000480943 PCSK7Q16549 785 aa8.81□□□□□ -1
VPS50-215ENST00000480943 BTLAQ7Z6A9 289 aa8.81□□□□□ -1
VPS50-215ENST00000480943 ZDHHC13Q8IUH4 622 aa8.81□□□□□ -1
VPS50-215ENST00000480943 SERPINA10Q9UK55 444 aa8.81□□□□□ -1
VPS50-215ENST00000480943 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
VPS50-215ENST00000480943 TNS3Q68CZ2 1445 aa8.8□□□□□ -1
VPS50-215ENST00000480943 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
VPS50-215ENST00000480943 SWI5Q1ZZU3 235 aa8.8□□□□□ -1
VPS50-215ENST00000480943 STK32AQ8WU08 396 aa8.8□□□□□ -1
VPS50-215ENST00000480943 EIF3AQ14152 1382 aaKnown RBP8.8□□□□□ -1
VPS50-215ENST00000480943 BRWD3Q6RI45 1802 aa8.8□□□□□ -1
VPS50-215ENST00000480943 PHRF1Q9P1Y6 1649 aaKnown RBP8.8□□□□□ -1
VPS50-215ENST00000480943 ATP7BP35670 1465 aa8.79□□□□□ -1
VPS50-215ENST00000480943 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
VPS50-215ENST00000480943 SRPK2P78362 688 aaKnown RBP8.79□□□□□ -1
VPS50-215ENST00000480943 IER5Q5VY09 327 aa8.79□□□□□ -1
VPS50-215ENST00000480943 KRTAP5-3Q6L8H2 238 aa8.79□□□□□ -1
VPS50-215ENST00000480943 KRT28Q7Z3Y7 464 aa8.79□□□□□ -1
VPS50-215ENST00000480943 PMFBP1Q8TBY8 1022 aa8.79□□□□□ -1
VPS50-215ENST00000480943 DNAJB12Q9NXW2 375 aaKnown RBP8.79□□□□□ -1
VPS50-215ENST00000480943 NRAPQ86VF7 1730 aa8.79□□□□□ -1
VPS50-215ENST00000480943 RGS12O14924 1447 aa8.79□□□□□ -1
VPS50-215ENST00000480943 SPATA31A3Q5VYP0 1347 aa8.79□□□□□ -1
VPS50-215ENST00000480943 TGFBR3LH3BV60 316 aa8.78□□□□□ -1
VPS50-215ENST00000480943 DHX15O43143 795 aaKnown RBP8.78□□□□□ -1
VPS50-215ENST00000480943 ATG7O95352 703 aa8.78□□□□□ -1
VPS50-215ENST00000480943 RXRBP28702 533 aa8.78□□□□□ -1
VPS50-215ENST00000480943 LCE5AQ5TCM9 118 aa8.78□□□□□ -1
VPS50-215ENST00000480943 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
VPS50-215ENST00000480943 SIN3AQ96ST3 1273 aa8.78□□□□□ -1
VPS50-215ENST00000480943 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
VPS50-215ENST00000480943 FRRS1LQ9P0K9 344 aa8.78□□□□□ -1
VPS50-215ENST00000480943 PRR36Q9H6K5 1346 aa8.78□□□□□ -1
VPS50-215ENST00000480943 PRMT3O60678 531 aa8.77□□□□□ -1.01
VPS50-215ENST00000480943 NFIAQ12857 509 aa8.77□□□□□ -1.01
VPS50-215ENST00000480943 DGKZQ13574 1117 aa8.77□□□□□ -1.01
VPS50-215ENST00000480943 KLK14Q9P0G3 267 aa8.77□□□□□ -1.01
VPS50-215ENST00000480943 AKAP12Q02952 1782 aa8.76□□□□□ -1.01
VPS50-215ENST00000480943 COL14A1Q05707 1796 aaKnown RBP8.76□□□□□ -1.01
VPS50-215ENST00000480943 SBNO1A3KN83 1393 aa8.76□□□□□ -1.01
VPS50-215ENST00000480943 DBX1A6NMT0 343 aa8.76□□□□□ -1.01
VPS50-215ENST00000480943 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms