RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SNAP23O00161 211 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 INPP5BP32019 993 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.07
USP11-208ENST00000480104 TTLL11Q8NHH1 800 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 COA7Q96BR5 231 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 MYD88Q99836 296 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 LRFN3Q9BTN0 628 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 ANKRD2Q9GZV1 360 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 THEGQ9P2T0 379 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 SERPINA10Q9UK55 444 aa15.46■□□□□ 0.07
USP11-208ENST00000480104 IL1R1P14778 569 aa15.45■□□□□ 0.06
USP11-208ENST00000480104 CACNB3P54284 484 aa15.45■□□□□ 0.06
USP11-208ENST00000480104 GRIN2CQ14957 1233 aa15.45■□□□□ 0.06
USP11-208ENST00000480104 RIC3Q7Z5B4 369 aa15.45■□□□□ 0.06
USP11-208ENST00000480104 CCDC191Q8NCU4 936 aa15.45■□□□□ 0.06
USP11-208ENST00000480104 CWC25Q9NXE8 425 aaPredicted RBP15.45■□□□□ 0.06
USP11-208ENST00000480104 CHD9Q3L8U1 2897 aa15.45■□□□□ 0.06
USP11-208ENST00000480104 IGHMBP2P38935 993 aaKnown RBP15.44■□□□□ 0.06
USP11-208ENST00000480104 NECAB3Q96P71 396 aaPredicted RBP15.44■□□□□ 0.06
USP11-208ENST00000480104 DBF4Q9UBU7 674 aaPredicted RBP15.44■□□□□ 0.06
USP11-208ENST00000480104 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
USP11-208ENST00000480104 PPM1EQ8WY54 764 aa15.43■□□□□ 0.06
USP11-208ENST00000480104 PLEKHF1Q96S99 279 aa15.43■□□□□ 0.06
USP11-208ENST00000480104 BABAM1Q9NWV8 329 aa15.43■□□□□ 0.06
USP11-208ENST00000480104 DOCK3Q8IZD9 2030 aa15.43■□□□□ 0.06
USP11-208ENST00000480104 MRPS5P82675 430 aaKnown RBP15.42■□□□□ 0.06
USP11-208ENST00000480104 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
USP11-208ENST00000480104 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
USP11-208ENST00000480104 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
USP11-208ENST00000480104 ZNF341Q9BYN7 854 aa15.42■□□□□ 0.06
USP11-208ENST00000480104 HYPKQ9NX55 129 aa15.42■□□□□ 0.06
USP11-208ENST00000480104 REV3LO60673 3130 aa15.41■□□□□ 0.06
USP11-208ENST00000480104 CRKP46108 304 aa15.41■□□□□ 0.06
USP11-208ENST00000480104 CHRNDQ07001 517 aa15.41■□□□□ 0.06
USP11-208ENST00000480104 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
USP11-208ENST00000480104 C15orf52Q6ZUT6 534 aaKnown RBP15.41■□□□□ 0.06
USP11-208ENST00000480104 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
USP11-208ENST00000480104 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
USP11-208ENST00000480104 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 MAST2Q6P0Q8 1798 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
USP11-208ENST00000480104 MFSD14BQ5SR56 506 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 ANKRD13CQ8N6S4 541 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 TRIB2Q92519 343 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 HOOK2Q96ED9 719 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 PRKAG2Q9UGJ0 569 aa15.4■□□□□ 0.06
USP11-208ENST00000480104 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
USP11-208ENST00000480104 MAP3K21Q5TCX8 1036 aa15.39■□□□□ 0.05
USP11-208ENST00000480104 POTEEQ6S8J3 1075 aa15.39■□□□□ 0.05
USP11-208ENST00000480104 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
USP11-208ENST00000480104 CHD7Q9P2D1 2997 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 WDFY4Q6ZS81 3184 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 CXCL11O14625 94 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 TAF5LO75529 589 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 MRE11P49959 708 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 GADL1Q6ZQY3 521 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 MPHOSPH8Q99549 860 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 P2RX7Q99572 595 aaKnown RBP15.38■□□□□ 0.05
USP11-208ENST00000480104 EPHX3Q9H6B9 360 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
USP11-208ENST00000480104 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
USP11-208ENST00000480104 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
USP11-208ENST00000480104 ITGA6P23229 1130 aa15.37■□□□□ 0.05
USP11-208ENST00000480104 FASTKD5Q7L8L6 764 aaKnown RBP15.37■□□□□ 0.05
USP11-208ENST00000480104 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
USP11-208ENST00000480104 FAM83AQ86UY5 434 aa15.37■□□□□ 0.05
USP11-208ENST00000480104 ZNF112Q9UJU3 913 aa15.37■□□□□ 0.05
USP11-208ENST00000480104 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
USP11-208ENST00000480104 SLC45A1Q9Y2W3 748 aa15.37■□□□□ 0.05
USP11-208ENST00000480104 HOXB7P09629 217 aa15.36■□□□□ 0.05
USP11-208ENST00000480104 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
USP11-208ENST00000480104 PDE3AQ14432 1141 aa15.36■□□□□ 0.05
USP11-208ENST00000480104 FAM110CQ1W6H9 321 aa15.36■□□□□ 0.05
USP11-208ENST00000480104 NOL9Q5SY16 702 aaKnown RBP15.36■□□□□ 0.05
USP11-208ENST00000480104 LHX8Q68G74 356 aa15.36■□□□□ 0.05
USP11-208ENST00000480104 SENP6Q9GZR1 1112 aaPredicted RBP15.36■□□□□ 0.05
USP11-208ENST00000480104 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
USP11-208ENST00000480104 DNAJB2P25686 324 aa15.35■□□□□ 0.05
USP11-208ENST00000480104 RTP1P59025 263 aa15.35■□□□□ 0.05
USP11-208ENST00000480104 GRIK5Q16478 980 aa15.35■□□□□ 0.05
USP11-208ENST00000480104 AKNAD1Q5T1N1 836 aa15.35■□□□□ 0.05
USP11-208ENST00000480104 BADQ92934 168 aa15.35■□□□□ 0.05
USP11-208ENST00000480104 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
USP11-208ENST00000480104 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
USP11-208ENST00000480104 ZNF576Q9H609 170 aa15.34■□□□□ 0.05
USP11-208ENST00000480104 MYH3P11055 1940 aa15.34■□□□□ 0.05
USP11-208ENST00000480104 CFAP54Q96N23 3096 aa15.33■□□□□ 0.05
USP11-208ENST00000480104 CCND3P30281 292 aaPredicted RBP15.33■□□□□ 0.04
USP11-208ENST00000480104 RIPK4P57078 832 aa15.33■□□□□ 0.04
USP11-208ENST00000480104 CCDC85BQ15834 202 aaPredicted RBP15.33■□□□□ 0.04
USP11-208ENST00000480104 FKBP1CQ5VVH2 108 aa15.33■□□□□ 0.04
USP11-208ENST00000480104 RNPC3Q96LT9 517 aaKnown RBP15.33■□□□□ 0.04
USP11-208ENST00000480104 GAS2L1Q99501 681 aaPredicted RBP15.33■□□□□ 0.04
USP11-208ENST00000480104 PRDM5Q9NQX1 630 aaPredicted RBP15.33■□□□□ 0.04
USP11-208ENST00000480104 FAM86C2PA6NEL3 165 aa15.32■□□□□ 0.04
USP11-208ENST00000480104 CHL1O00533 1208 aa15.32■□□□□ 0.04
USP11-208ENST00000480104 CYP2B6P20813 491 aa15.32■□□□□ 0.04
USP11-208ENST00000480104 CACNB2Q08289 660 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms