RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
SMURF1-204ENST00000480055 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 ELP3Q9H9T3 547 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
SMURF1-204ENST00000480055 PTCH2Q9Y6C5 1203 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 IL16Q14005 1332 aa13.09□□□□□ -0.31
SMURF1-204ENST00000480055 F6X3S4 739 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 FOXO4P98177 505 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 TNFAIP1Q13829 316 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 LMBR1LQ6UX01 489 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 BRI3BPQ8WY22 251 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
SMURF1-204ENST00000480055 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
SMURF1-204ENST00000480055 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
SMURF1-204ENST00000480055 ARHGEF6Q15052 776 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 TAF1CQ15572 869 aaPredicted RBP13.07□□□□□ -0.32
SMURF1-204ENST00000480055 TMEM92Q6UXU6 159 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
SMURF1-204ENST00000480055 NBPF11Q86T75 865 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 TEPSINQ96N21 525 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
SMURF1-204ENST00000480055 PTPRFP10586 1907 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 FAM205AQ6ZU69 1335 aa13.07□□□□□ -0.32
SMURF1-204ENST00000480055 ALPK3Q96L96 1907 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 CCL15-CCL14A0A0B4J2E2 113 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 VAMP4O75379 141 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 GTF2A2P52657 109 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 VGLL4Q14135 290 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 CCL15Q16663 113 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 MFSD14BQ5SR56 506 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 BEND3Q5T5X7 828 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 FAM43AQ8N2R8 423 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMURF1-204ENST00000480055 ZFYVE28Q9HCC9 887 aa13.06□□□□□ -0.32
SMURF1-204ENST00000480055 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
SMURF1-204ENST00000480055 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
SMURF1-204ENST00000480055 DOCK2Q92608 1830 aa13.05□□□□□ -0.32
SMURF1-204ENST00000480055 H0YGN5 161 aa13.05□□□□□ -0.32
SMURF1-204ENST00000480055 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
SMURF1-204ENST00000480055 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
SMURF1-204ENST00000480055 DDX27Q96GQ7 796 aaKnown RBP13.05□□□□□ -0.32
SMURF1-204ENST00000480055 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
SMURF1-204ENST00000480055 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 GRM8O00222 908 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
SMURF1-204ENST00000480055 GYG1P46976 350 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 WDR63Q8IWG1 891 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
SMURF1-204ENST00000480055 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
SMURF1-204ENST00000480055 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
SMURF1-204ENST00000480055 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 TLR2O60603 784 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 FRAT2O75474 233 aaPredicted RBP13.03□□□□□ -0.32
SMURF1-204ENST00000480055 TNNI2P48788 182 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 MAP3K9P80192 1104 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
SMURF1-204ENST00000480055 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
SMURF1-204ENST00000480055 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
SMURF1-204ENST00000480055 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 ARHGAP39Q9C0H5 1083 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 TMEM39BQ9GZU3 492 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 CSADQ9Y600 493 aa13.03□□□□□ -0.32
SMURF1-204ENST00000480055 RANBP2P49792 3224 aaKnown RBP13.02□□□□□ -0.32
SMURF1-204ENST00000480055 GNRH1P01148 92 aa13.02□□□□□ -0.33
SMURF1-204ENST00000480055 CHAF1AQ13111 956 aaPredicted RBP13.02□□□□□ -0.33
SMURF1-204ENST00000480055 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
SMURF1-204ENST00000480055 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
SMURF1-204ENST00000480055 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
SMURF1-204ENST00000480055 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
SMURF1-204ENST00000480055 DOCK3Q8IZD9 2030 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
SMURF1-204ENST00000480055 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
SMURF1-204ENST00000480055 CETPP11597 493 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 CRKP46108 304 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 PRMT2P55345 433 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 FOXK1P85037 733 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 KIF22Q14807 665 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
SMURF1-204ENST00000480055 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
SMURF1-204ENST00000480055 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
SMURF1-204ENST00000480055 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
SMURF1-204ENST00000480055 PHIPQ8WWQ0 1821 aa13.01□□□□□ -0.33
SMURF1-204ENST00000480055 BTBD19C9JJ37 291 aa13□□□□□ -0.33
SMURF1-204ENST00000480055 ALDH1L1O75891 902 aa13□□□□□ -0.33
SMURF1-204ENST00000480055 DSG2Q14126 1118 aa13□□□□□ -0.33
SMURF1-204ENST00000480055 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
SMURF1-204ENST00000480055 ERO1BQ86YB8 467 aa13□□□□□ -0.33
SMURF1-204ENST00000480055 DOCK1Q14185 1865 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms