RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 MFSD14BQ5SR56 506 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 TTC22Q5TAA0 569 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 GPC2Q8N158 579 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 ZSWIM6Q9HCJ5 1215 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 AKAP11Q9UKA4 1901 aa11.66□□□□□ -0.54
CD46-214ENST00000480003 SCN9AQ15858 1988 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 DICER1Q9UPY3 1922 aaKnown RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 GOLIM4O00461 696 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 DDNO94850 711 aaPredicted RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 RPS12P25398 132 aaKnown RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 RGS3P49796 1198 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 MMP14P50281 582 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 SPTY2D1Q68D10 685 aaPredicted RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 ZGPATQ8N5A5 531 aaKnown RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 EVI5LQ96CN4 794 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
CD46-214ENST00000480003 ARAP2Q8WZ64 1704 aa11.65□□□□□ -0.54
CD46-214ENST00000480003 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
CD46-214ENST00000480003 MAP4K4O95819 1239 aaPredicted RBP11.64□□□□□ -0.55
CD46-214ENST00000480003 PRDX5P30044 214 aa11.64□□□□□ -0.55
CD46-214ENST00000480003 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
CD46-214ENST00000480003 NSUN4Q96CB9 384 aaKnown RBP11.64□□□□□ -0.55
CD46-214ENST00000480003 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
CD46-214ENST00000480003 POTECB2RU33 542 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 LDHBP07195 334 aaKnown RBP11.63□□□□□ -0.55
CD46-214ENST00000480003 SDSP20132 328 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 GMPSP49915 693 aaPredicted RBP11.63□□□□□ -0.55
CD46-214ENST00000480003 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
CD46-214ENST00000480003 HDLBPQ00341 1268 aaKnown RBP11.63□□□□□ -0.55
CD46-214ENST00000480003 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 GPR153Q6NV75 609 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 LRP2BPQ9P2M1 347 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
CD46-214ENST00000480003 GJA3Q9Y6H8 435 aa11.63□□□□□ -0.55
CD46-214ENST00000480003 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 SCNN1DP51172 638 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
CD46-214ENST00000480003 HHIPL2Q6UWX4 724 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 CNTROBQ8N137 903 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
CD46-214ENST00000480003 ZBED3Q96IU2 234 aaPredicted RBP11.62□□□□□ -0.55
CD46-214ENST00000480003 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
CD46-214ENST00000480003 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 IDH1O75874 414 aaKnown RBP11.61□□□□□ -0.55
CD46-214ENST00000480003 CHGBP05060 677 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 HSPA6P17066 643 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 ADD2P35612 726 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 EPS15P42566 896 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 MECOMQ03112 1051 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 MAP3K12Q12852 859 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 SLC9C2Q5TAH2 1124 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 GPRC5DQ9NZD1 345 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
CD46-214ENST00000480003 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
CD46-214ENST00000480003 RNF113AO15541 343 aaKnown RBP11.6□□□□□ -0.55
CD46-214ENST00000480003 LDHCP07864 332 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 PDE6AP16499 860 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 PPP4CP60510 307 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 SLFNL1Q499Z3 407 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
CD46-214ENST00000480003 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
CD46-214ENST00000480003 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 HDAC9Q9UKV0 1011 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 GAKO14976 1311 aa11.6□□□□□ -0.55
CD46-214ENST00000480003 ZNF646O15015 1829 aaPredicted RBP11.59□□□□□ -0.55
CD46-214ENST00000480003 GPR75-ASB3A0A0A6YYF3 556 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 H7C1D1 291 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 ZFYP08048 801 aaPredicted RBP11.59□□□□□ -0.55
CD46-214ENST00000480003 CRKP46108 304 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 GSTO1P78417 241 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 ZMYM1Q5SVZ6 1142 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 NAA16Q6N069 864 aaPredicted RBP11.59□□□□□ -0.55
CD46-214ENST00000480003 ZSCAN25Q6NSZ9 544 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 ADGRA1Q86SQ6 560 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 MAGEB6Q8N7X4 407 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 PRMT6Q96LA8 375 aaPredicted RBP11.59□□□□□ -0.55
CD46-214ENST00000480003 ZDHHC15Q96MV8 337 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■□□□ 12.5
CD46-214ENST00000480003 PCDHAC2Q9Y5I4 1007 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms