RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 ZNF652Q9Y2D9 606 aa22.24■■□□□ 1.15
TNFRSF8-204ENST00000479933 METAP2P50579 478 aaKnown RBP eCLIP22.23■■□□□ 1.15
TNFRSF8-204ENST00000479933 CHAF1AQ13111 956 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF8-204ENST00000479933 RASGRF1Q13972 1273 aa22.23■■□□□ 1.15
TNFRSF8-204ENST00000479933 GOLPH3LQ9H4A5 285 aa22.23■■□□□ 1.15
TNFRSF8-204ENST00000479933 STK38Q15208 465 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 SF3A1Q15459 793 aaKnown RBP22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 CYB5R4Q7L1T6 521 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 LINC00301Q8NCQ3 95 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 DNAJC25Q9H1X3 360 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 TIAM2Q8IVF5 1701 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 NTSR2O95665 410 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 SYNE3Q6ZMZ3 975 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 MAGEB6Q8N7X4 407 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 MARCH10Q8NA82 808 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 ZNF830Q96NB3 372 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 NAPBQ9H115 298 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 PCDHA7Q9UN72 937 aa22.22■■□□□ 1.15
TNFRSF8-204ENST00000479933 ZNF831Q5JPB2 1677 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 PPFIA3O75145 1194 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 MYSM1Q5VVJ2 828 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 BARGINQ6ZT62 677 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 SGMS1Q86VZ5 419 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 IFNL3Q8IZI9 196 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 NACAP1Q9BZK3 213 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 ANO10Q9NW15 660 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 NIP7Q9Y221 180 aaKnown RBP eCLIP22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 A0A0G2JS52 829 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 MBD4O95243 580 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 LIFRP42702 1097 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 APOA5Q6Q788 366 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 CDC5LQ99459 802 aaKnown RBP22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 KRT23Q9C075 422 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 SEC31BQ9NQW1 1179 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 SPATA31A5Q5VU36 1347 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 SPATA31A7Q8IWB4 1347 aa22.21■■□□□ 1.15
TNFRSF8-204ENST00000479933 MYH14Q7Z406 1995 aaKnown RBP22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 SPDYE4A6NLX3 237 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 B4E1Z4 1266 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 KIF23Q02241 960 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 ITPK1Q13572 414 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 PLA2G4DQ86XP0 818 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 MPNDQ8N594 471 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 ACSBG1Q96GR2 724 aa22.2■■□□□ 1.14
TNFRSF8-204ENST00000479933 FAM177BA6PVY3 158 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 GOLGA6L19H0YKK7 550 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 ZBTB43O43298 467 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 U2AF2P26368 475 aaKnown RBP eCLIP22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 ZNF75DP51815 510 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 ZNF771Q7L3S4 317 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 FMR1NBQ8N0W7 255 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 IGDCC4Q8TDY8 1250 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 TRIM5Q9C035 493 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 CGNQ9P2M7 1197 aaKnown RBP22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 SPTLC2O15270 562 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 OTUD7BQ6GQQ9 843 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 CLEC4GQ6UXB4 293 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 SPC24Q8NBT2 197 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 MTA3Q9BTC8 594 aa22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 COL5A3P25940 1745 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF8-204ENST00000479933 NEDD4P46934 1319 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 CDC25BP30305 580 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 TMEM67Q5HYA8 995 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 SARM1Q6SZW1 724 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 NFXL1Q6ZNB6 911 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 ALG1Q9BT22 464 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 CCDC66A2RUB6 948 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 POLR3DP05423 398 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 FAM193AP78312 1265 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 IQCB1Q15051 598 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 AKNAD1Q5T1N1 836 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 ANO1Q5XXA6 986 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 KIAA1524Q8TCG1 905 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 NAT10Q9H0A0 1025 aaKnown RBP22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 LY9Q9HBG7 655 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 EPB41L4AQ9HCS5 686 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 CLIC4Q9Y696 253 aa22.18■■□□□ 1.14
TNFRSF8-204ENST00000479933 RIOK3O14730 519 aaKnown RBP22.17■■□□□ 1.14
TNFRSF8-204ENST00000479933 RGL2O15211 777 aa22.17■■□□□ 1.14
TNFRSF8-204ENST00000479933 RAB11FIP4Q86YS3 637 aa22.17■■□□□ 1.14
TNFRSF8-204ENST00000479933 STK36Q9NRP7 1315 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 CHRNDQ07001 517 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 MFSD6Q6ZSS7 791 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 ARMT1Q9H993 441 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 NID2Q14112 1375 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 GOLGA8AA7E2F4 631 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 GSG1L2A8MUP6 293 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 IARSP41252 1262 aaKnown RBP22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 TRIM29Q14134 588 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 DRC7Q8IY82 874 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 CEP57L1Q8IYX8 460 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 SDF4Q9BRK5 362 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 KCNF1Q9H3M0 494 aa22.16■■□□□ 1.14
TNFRSF8-204ENST00000479933 BCAMP50895 628 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 SART3Q15020 963 aaKnown RBP22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 STAG1Q8WVM7 1258 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 WASF1Q92558 559 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms