RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 RAB11FIP3O75154 756 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 RPSAP08865 295 aaKnown RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 CLCN2P51788 898 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 RCN1Q15293 331 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 SMUG1Q53HV7 270 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 CCDC170Q8IYT3 715 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 USP33Q8TEY7 942 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 CTNNBL1Q8WYA6 563 aaPredicted RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 TRMT1Q9NXH9 659 aaKnown RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 DDX20Q9UHI6 824 aaKnown RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 CFAP69A5D8W1 941 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 IBSPP21815 317 aaPredicted RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 MIS18BP1Q6P0N0 1132 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 L2HGDHQ9H9P8 463 aa11.91□□□□□ -0.5
NUP35-209ENST00000479162 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
NUP35-209ENST00000479162 DYTNA2CJ06 578 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 TRIM64CA6NLI5 447 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 H3BQF6 201 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 EBAG9O00559 213 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 GNAI1P63096 354 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 PDE4BQ07343 736 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 CC2D1AQ6P1N0 951 aaPredicted RBP11.9□□□□□ -0.5
NUP35-209ENST00000479162 CEP57Q86XR8 500 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 SH3GL1Q99961 368 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 CAPS2Q9BXY5 557 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 ARFGAP3Q9NP61 516 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 GINM1Q9NU53 330 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 SWAP70Q9UH65 585 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 PPLO60437 1756 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 TMEM221A6NGB7 291 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 CYP27B1O15528 508 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 MAK16Q9BXY0 300 aaKnown RBP11.9□□□□□ -0.5
NUP35-209ENST00000479162 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.5
NUP35-209ENST00000479162 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 MCM2P49736 904 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
NUP35-209ENST00000479162 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 GALNT17Q6IS24 598 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 PRAG1Q86YV5 1406 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 CCDC50Q8IVM0 306 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
NUP35-209ENST00000479162 OSBPL10Q9BXB5 764 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 SEL1LQ9UBV2 794 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 SPO11Q9Y5K1 396 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 LAMC1P11047 1609 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 NUP155O75694 1391 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 GOLGA6L9A6NEM1 432 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
NUP35-209ENST00000479162 TRIM37O94972 964 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 FOSL1P15407 271 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 ALOX15P16050 662 aaPredicted RBP11.89□□□□□ -0.51
NUP35-209ENST00000479162 ZFXP17010 805 aaPredicted RBP11.89□□□□□ -0.51
NUP35-209ENST00000479162 INHBCP55103 352 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 UBE2Q1Q7Z7E8 422 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 CLIP3Q96DZ5 547 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 XAGE2Q96GT9 111 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 PLEKHA4Q9H4M7 779 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
NUP35-209ENST00000479162 ZNHIT6Q9NWK9 470 aaKnown RBP11.89□□□□□ -0.51
NUP35-209ENST00000479162 MSL3P1P0C860 447 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 GUCY1B3Q02153 619 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 NANOGNBQ7Z5D8 188 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 KLC4Q9NSK0 619 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 TUBGCP4Q9UGJ1 667 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.88□□□□□ -0.51
NUP35-209ENST00000479162 IQGAP1P46940 1657 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
NUP35-209ENST00000479162 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
NUP35-209ENST00000479162 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
NUP35-209ENST00000479162 ZNF132P52740 706 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 GBP7Q8N8V2 638 aaPredicted RBP11.88□□□□□ -0.51
NUP35-209ENST00000479162 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
NUP35-209ENST00000479162 HOOK2Q96ED9 719 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
NUP35-209ENST00000479162 LRMPQ12912 555 aa11.87□□□□□ -0.51
NUP35-209ENST00000479162 BTG3Q14201 252 aaPredicted RBP11.87□□□□□ -0.51
NUP35-209ENST00000479162 CORO1CQ9ULV4 474 aaPredicted RBP11.87□□□□□ -0.51
NUP35-209ENST00000479162 MYO5BQ9ULV0 1848 aa11.87□□□□□ -0.51
NUP35-209ENST00000479162 MYO1FO00160 1098 aa11.87□□□□□ -0.51
NUP35-209ENST00000479162 FSBPO95073 299 aa11.87□□□□□ -0.51
NUP35-209ENST00000479162 ACTN3Q08043 901 aaPredicted RBP11.87□□□□□ -0.51
NUP35-209ENST00000479162 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
NUP35-209ENST00000479162 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
NUP35-209ENST00000479162 GABPB2Q8TAK5 448 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms