RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 LDHCP07864 332 aa16.36■□□□□ 0.21
NUDCD3-207ENST00000478769 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
NUDCD3-207ENST00000478769 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
NUDCD3-207ENST00000478769 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
NUDCD3-207ENST00000478769 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
NUDCD3-207ENST00000478769 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 M0R2C6 588 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 RHBDL3P58872 404 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 NMIQ13287 307 aaPredicted RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 CDC42EP5Q6NZY7 148 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 PNMA8AQ86V59 439 aaPredicted RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 APPBP2Q92624 585 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 RIOK1Q9BRS2 568 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 PUS7LQ9H0K6 701 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 TDRD3Q9H7E2 651 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 GGA3Q9NZ52 723 aa16.35■□□□□ 0.21
NUDCD3-207ENST00000478769 KIF3CO14782 793 aa16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 MBD4O95243 580 aa16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 CACNB3P54284 484 aa16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 PPP4CP60510 307 aa16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 TICAM2Q86XR7 235 aa16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 LCORLQ8N3X6 602 aa16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
NUDCD3-207ENST00000478769 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
NUDCD3-207ENST00000478769 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
NUDCD3-207ENST00000478769 ANGEL2Q5VTE6 544 aaKnown RBP16.33■□□□□ 0.2
NUDCD3-207ENST00000478769 NOL10Q9BSC4 688 aaKnown RBP16.33■□□□□ 0.2
NUDCD3-207ENST00000478769 ARMT1Q9H993 441 aa16.33■□□□□ 0.2
NUDCD3-207ENST00000478769 DIAPH3Q9NSV4 1193 aa16.33■□□□□ 0.2
NUDCD3-207ENST00000478769 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
NUDCD3-207ENST00000478769 MYO1BO43795 1136 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 BAG3O95817 575 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 CHMLP26374 656 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 NFIAQ12857 509 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 IL25Q9H293 177 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 VEZTQ9HBM0 779 aa16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
NUDCD3-207ENST00000478769 CNTNAP1P78357 1384 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 PITPNM2Q9BZ72 1349 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 HIP1O00291 1037 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 GPAA1O43292 621 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 ZNF589Q86UQ0 364 aaPredicted RBP16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 LDHDQ86WU2 507 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 ZC3H15Q8WU90 426 aaKnown RBP16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 AIDAQ96BJ3 306 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 DDX4Q9NQI0 724 aaKnown RBP16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 HELLSQ9NRZ9 838 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
NUDCD3-207ENST00000478769 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
NUDCD3-207ENST00000478769 CDC45O75419 566 aa16.3■□□□□ 0.2
NUDCD3-207ENST00000478769 PLCG2P16885 1265 aa16.3■□□□□ 0.2
NUDCD3-207ENST00000478769 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
NUDCD3-207ENST00000478769 FAM198AQ9UFP1 575 aa16.3■□□□□ 0.2
NUDCD3-207ENST00000478769 NAV1Q8NEY1 1877 aa16.3■□□□□ 0.2
NUDCD3-207ENST00000478769 FLT1P17948 1338 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 PRKAB2O43741 272 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 APOBEC3FQ8IUX4 373 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 STRBPQ96SI9 672 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
NUDCD3-207ENST00000478769 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 RAD50Q92878 1312 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 FOXP2O15409 715 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 PICALMQ13492 652 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 SDR42E1Q8WUS8 393 aa16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 DCPSQ96C86 337 aaKnown RBP16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 GLIS2Q9BZE0 524 aaPredicted RBP16.28■□□□□ 0.2
NUDCD3-207ENST00000478769 TCP10Q12799 353 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 CHADLQ6NUI6 762 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 KRT26Q7Z3Y9 468 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 MAPKAPK5Q8IW41 473 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 ZFPM1Q8IX07 1006 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 SLC4A4Q9Y6R1 1079 aa16.27■□□□□ 0.2
NUDCD3-207ENST00000478769 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.19
NUDCD3-207ENST00000478769 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms