RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 PRPF40AO75400 957 aaKnown RBP3.15□□□□□ -1.91
PDE1C-208ENST00000478736 GSTP1P09211 210 aaKnown RBP3.15□□□□□ -1.91
PDE1C-208ENST00000478736 ADMP35318 185 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 SOX4Q06945 474 aaPredicted RBP3.15□□□□□ -1.91
PDE1C-208ENST00000478736 PDE3AQ14432 1141 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 INPP5AQ14642 412 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 NUTM2GQ5VZR2 741 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 MAP1SQ66K74 1059 aaPredicted RBP3.15□□□□□ -1.91
PDE1C-208ENST00000478736 SULF2Q8IWU5 870 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 SMG8Q8ND04 991 aaKnown RBP3.15□□□□□ -1.91
PDE1C-208ENST00000478736 GPBAR1Q8TDU6 330 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 FBF1Q8TES7 1133 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 KCNB2Q92953 911 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 UTP4Q969X6 686 aaKnown RBP3.15□□□□□ -1.91
PDE1C-208ENST00000478736 MYRFLQ96LU7 910 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 KRTAP4-5Q9BYR2 181 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 RNF208Q9H0X6 261 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 C7orf69Q9H7B7 122 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 TMEM39AQ9NV64 488 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 TLR6Q9Y2C9 796 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 PCDHGC5Q9Y5F6 944 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 ACTL7BQ9Y614 415 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 DCDC2CA8MYV0 355 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 TMPRSS2O15393 492 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 CYP11A1P05108 521 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 NFICP08651 508 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 ADH5P11766 374 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 EIF4BP23588 611 aaKnown RBP3.14□□□□□ -1.91
PDE1C-208ENST00000478736 ARNTP27540 789 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 MAP4P27816 1152 aaKnown RBP3.14□□□□□ -1.91
PDE1C-208ENST00000478736 ATP2B2Q01814 1243 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 ZNF252P-AS1Q0IIN9 211 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 PSMD2Q13200 908 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 RPS26P11Q5JNZ5 115 aaPredicted RBP3.14□□□□□ -1.91
PDE1C-208ENST00000478736 FDX2Q6P4F2 183 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 BEND4Q6ZU67 534 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 DYMQ7RTS9 669 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 C12orf40Q86WS4 652 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 FAM20CQ8IXL6 584 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 GIPC2Q8TF65 315 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 ZNF428Q96B54 188 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 CORO1BQ9BR76 489 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 KCNF1Q9H3M0 494 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 CBX8Q9HC52 389 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 DISC1Q9NRI5 854 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 AP4E1Q9UPM8 1137 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 U3KQE9 123 aa3.14□□□□□ -1.91
PDE1C-208ENST00000478736 SART1O43290 800 aaKnown RBP3.13□□□□□ -1.91
PDE1C-208ENST00000478736 ADAMTS4O75173 837 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 NEFMP07197 916 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 H2AFB1P0C5Y9 115 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 H2AFB2P0C5Z0 115 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 HCLS1P14317 486 aaPredicted RBP3.13□□□□□ -1.91
PDE1C-208ENST00000478736 ZNF16P17020 682 aaPredicted RBP3.13□□□□□ -1.91
PDE1C-208ENST00000478736 FSTP19883 344 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 RAB6AP20340 208 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 GSTT1P30711 240 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 HOXA10P31260 410 aaPredicted RBP3.13□□□□□ -1.91
PDE1C-208ENST00000478736 NFKBIBQ15653 356 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 ZMYM1Q5SVZ6 1142 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 PCNX4Q63HM2 1172 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.13□□□□□ -1.91
PDE1C-208ENST00000478736 TMC4Q7Z404 712 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 GATA6Q92908 595 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 MFSD14AQ96MC6 490 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 FANCD2OSQ96PS1 177 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 BCL2L13Q9BXK5 485 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 SEMA6CQ9H3T2 930 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 COPRSQ9NQ92 184 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 RAD18Q9NS91 495 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 PPP4R2Q9NY27 417 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 CACNA2D2Q9NY47 1150 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 STOML1Q9UBI4 398 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 FAM8A1Q9UBU6 413 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 TTF2Q9UNY4 1162 aaKnown RBP3.13□□□□□ -1.91
PDE1C-208ENST00000478736 SPG7Q9UQ90 795 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 RAXQ9Y2V3 346 aa3.13□□□□□ -1.91
PDE1C-208ENST00000478736 PRR19A6NJB7 356 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 UNCXA6NJT0 531 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 FAM170BA6NMN3 283 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 DHX15O43143 795 aaKnown RBP3.12□□□□□ -1.91
PDE1C-208ENST00000478736 TGFB1P01137 390 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 F13BP05160 661 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 TFE3P19532 575 aaPredicted RBP3.12□□□□□ -1.91
PDE1C-208ENST00000478736 NME2P22392 152 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 VAMP1P23763 118 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 RXRBP28702 533 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 NTF4P34130 210 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 ASPAP45381 313 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 XPCQ01831 940 aaPredicted RBP3.12□□□□□ -1.91
PDE1C-208ENST00000478736 SEPT6Q14141 434 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 TTLL4Q14679 1199 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 CCDC85BQ15834 202 aaPredicted RBP3.12□□□□□ -1.91
PDE1C-208ENST00000478736 KIF4BQ2VIQ3 1234 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 ZC3H12AQ5D1E8 599 aaKnown RBP3.12□□□□□ -1.91
PDE1C-208ENST00000478736 PPM1JQ5JR12 505 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 ANKRD34AQ69YU3 496 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 SEZ6L2Q6UXD5 910 aa3.12□□□□□ -1.91
PDE1C-208ENST00000478736 NPM2Q86SE8 214 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms