RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PWP1Q13610 501 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 RELL1Q8IUW5 271 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 TMPRSS13Q9BYE2 586 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 CEP41Q9BYV8 373 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 CCDC86Q9H6F5 360 aaKnown RBP6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 GGT7Q9UJ14 662 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 GATA4P43694 442 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 FANCCQ00597 558 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 ANKRD34AQ69YU3 496 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 FDX2Q6P4F2 183 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 AGMOQ6ZNB7 445 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 RNF34Q969K3 372 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 RSRP1Q9BUV0 290 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 SUGCTQ9HAC7 445 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 SART1O43290 800 aaKnown RBP6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 AOC2O75106 756 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 TRIM37O94972 964 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 SLFN14P0C7P3 912 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 LIG1P18858 919 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 GBP2P32456 591 aaPredicted RBP6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 RASIP1Q5U651 963 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 Q6ZS46 218 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 ERMP1Q7Z2K6 904 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 F6X3S4 739 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 PHC3Q8NDX5 983 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 TMEM74Q96NL1 305 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 TLR6Q9Y2C9 796 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 SYNGAP1Q96PV0 1343 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 MINDY4BA8MYZ0 360 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 ZNF862O60290 1169 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 KIF4BQ2VIQ3 1234 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 DZIP1LQ8IYY4 767 aaKnown RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 MEGF10Q96KG7 1140 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 COPRSQ9NQ92 184 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 CACNA2D2Q9NY47 1150 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 GAS2O43903 313 aaKnown RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 TIAF1O95411 115 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 ITGB2P05107 769 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 ADH5P11766 374 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 DRD2P14416 443 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 TCF3P15923 654 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 PREPP48147 710 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 SOX4Q06945 474 aaPredicted RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 CAMK2GQ13555 558 aaPredicted RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 UBL7Q96S82 380 aaPredicted RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHA4Q9UN74 947 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 AP4E1Q9UPM8 1137 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 PF4P02776 101 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 ID3Q02535 119 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 LMNB2Q03252 620 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 SEPT6Q14141 434 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 UVSSAQ2YD98 709 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 USP48Q86UV5 1035 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 GAL3ST3Q96A11 431 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 FAM46AQ96IP4 442 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 RHOVQ96L33 236 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 MSTNO14793 375 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 EIF4A3P38919 411 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 C9orf131Q5VYM1 1079 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 CCDC84Q86UT8 332 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 METTL16Q86W50 562 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 NT5DC4Q86YG4 428 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 UTP4Q969X6 686 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 PPP1R9AQ9ULJ8 1098 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 TMPRSS2O15393 492 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 IGHA1P01876 353 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 USP11P51784 963 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 ZNF394Q53GI3 561 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 GOLM1Q8NBJ4 401 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms