RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 ADAMTS6Q9UKP5 1117 aa4.04□□□□□ -1.76
TMF1-202ENST00000477872 POLIQ9UNA4 740 aa4.04□□□□□ -1.76
TMF1-202ENST00000477872 AOC2O75106 756 aa4.03□□□□□ -1.76
TMF1-202ENST00000477872 CCNJLQ8IV13 435 aa4.03□□□□□ -1.76
TMF1-202ENST00000477872 PLD6Q8N2A8 252 aaKnown RBP4.03□□□□□ -1.76
TMF1-202ENST00000477872 LGR6Q9HBX8 967 aa4.03□□□□□ -1.76
TMF1-202ENST00000477872 ZFYVE28Q9HCC9 887 aa4.03□□□□□ -1.76
TMF1-202ENST00000477872 FOXD3Q9UJU5 478 aaPredicted RBP4.03□□□□□ -1.76
TMF1-202ENST00000477872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.02□□□□□ -1.77
TMF1-202ENST00000477872 TMEM265A0A087WTH1 108 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 LRRC10BA6NIK2 292 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 FAM87AP0C7U9 286 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 ZNF865P0CJ78 1059 aaPredicted RBP4.02□□□□□ -1.77
TMF1-202ENST00000477872 MPSTP25325 297 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 RAP1GAPP47736 663 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 AAMPQ13685 434 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 IFI16Q16666 785 aaKnown RBP4.02□□□□□ -1.77
TMF1-202ENST00000477872 AOC3Q16853 763 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 SLC23A3Q6PIS1 610 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 CILP2Q8IUL8 1156 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 SIAH1Q8IUQ4 282 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 FAM181AQ8N9Y4 354 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 FLAD1Q8NFF5 587 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 ZSCAN18Q8TBC5 510 aaPredicted RBP4.02□□□□□ -1.77
TMF1-202ENST00000477872 HRASLS5Q96KN8 279 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 SLAIN2Q9P270 581 aa4.02□□□□□ -1.77
TMF1-202ENST00000477872 A0A1W2PP55 124 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 B3GALT4O96024 378 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 SLFN14P0C7P3 912 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 NPR3P17342 541 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 GRIA4P48058 902 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 PDE3AQ14432 1141 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 SPRED3Q2MJR0 410 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 ANGEL2Q5VTE6 544 aaKnown RBP4.01□□□□□ -1.77
TMF1-202ENST00000477872 LILRA6Q6PI73 481 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 ZSWIM9Q86XI8 627 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 GTF3C2Q8WUA4 911 aaPredicted RBP4.01□□□□□ -1.77
TMF1-202ENST00000477872 PPP1R16BQ96T49 567 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 TRIM56Q9BRZ2 755 aaKnown RBP4.01□□□□□ -1.77
TMF1-202ENST00000477872 WDR18Q9BV38 432 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 LIN7BQ9HAP6 207 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 PPP1R9AQ9ULJ8 1098 aa4.01□□□□□ -1.77
TMF1-202ENST00000477872 FAM13AO94988 1023 aa4□□□□□ -1.77
TMF1-202ENST00000477872 ECEL1O95672 775 aa4□□□□□ -1.77
TMF1-202ENST00000477872 TSPAN15O95858 294 aa4□□□□□ -1.77
TMF1-202ENST00000477872 CFPP27918 469 aa4□□□□□ -1.77
TMF1-202ENST00000477872 CD96P40200 585 aa4□□□□□ -1.77
TMF1-202ENST00000477872 OXCT1P55809 520 aa4□□□□□ -1.77
TMF1-202ENST00000477872 CDK5R2Q13319 367 aa4□□□□□ -1.77
TMF1-202ENST00000477872 AP3B2Q13367 1082 aa4□□□□□ -1.77
TMF1-202ENST00000477872 KCNMB1Q16558 191 aa4□□□□□ -1.77
TMF1-202ENST00000477872 MLANAQ16655 118 aa4□□□□□ -1.77
TMF1-202ENST00000477872 ARHGAP27Q6ZUM4 889 aa4□□□□□ -1.77
TMF1-202ENST00000477872 TCF12Q99081 682 aa4□□□□□ -1.77
TMF1-202ENST00000477872 ATXN3LQ9H3M9 355 aa4□□□□□ -1.77
TMF1-202ENST00000477872 PIDD1Q9HB75 910 aa4□□□□□ -1.77
TMF1-202ENST00000477872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4□□□□□ -1.77
TMF1-202ENST00000477872 CRIM1Q9NZV1 1036 aa4□□□□□ -1.77
TMF1-202ENST00000477872 SNX11Q9Y5W9 270 aa4□□□□□ -1.77
TMF1-202ENST00000477872 ZNF503-AS2A6NEH8 195 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 PRRG2O14669 202 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 POLR3DP05423 398 aaPredicted RBP3.99□□□□□ -1.77
TMF1-202ENST00000477872 CEACAM5P06731 702 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 ANKLE2Q86XL3 938 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 C1QL4Q86Z23 238 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 GALNT12Q8IXK2 581 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 SMYD4Q8IYR2 804 aaPredicted RBP3.99□□□□□ -1.77
TMF1-202ENST00000477872 PLAGL2Q9UPG8 496 aa3.99□□□□□ -1.77
TMF1-202ENST00000477872 NCANO14594 1321 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 TMPRSS2O15393 492 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 LIG1P18858 919 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 ITPKAP23677 461 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 AFMP43652 599 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 HNRNPUQ00839 825 aaKnown RBP eCLIP3.98□□□□□ -1.77
TMF1-202ENST00000477872 ID3Q02535 119 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 KIAA0319Q5VV43 1072 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 LCNL1Q6ZST4 164 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 LRRC56Q8IYG6 542 aaPredicted RBP3.98□□□□□ -1.77
TMF1-202ENST00000477872 GJD3Q8N144 294 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 FANCD2OSQ96PS1 177 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 ZNF576Q9H609 170 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 RAPGEFL1Q9UHV5 662 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 PCOLCE2Q9UKZ9 415 aa3.98□□□□□ -1.77
TMF1-202ENST00000477872 B8ZZF3 427 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 FZD6O60353 706 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 RNGTTO60942 597 aaKnown RBP3.97□□□□□ -1.77
TMF1-202ENST00000477872 LEFTY1O75610 366 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 ZSCAN22P10073 491 aaPredicted RBP3.97□□□□□ -1.77
TMF1-202ENST00000477872 PTPN12Q05209 780 aaKnown RBP3.97□□□□□ -1.77
TMF1-202ENST00000477872 ASB11Q8WXH4 323 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 PBXIP1Q96AQ6 731 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 DUSP23Q9BVJ7 150 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 TNKS2Q9H2K2 1166 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 DISC1Q9NRI5 854 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 U3KQE9 123 aa3.97□□□□□ -1.77
TMF1-202ENST00000477872 NEFLP07196 543 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 ZP2Q05996 745 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 SF3B2Q13435 895 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms