RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PDIA5Q14554 519 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 ZRSR2Q15696 482 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 PLBD2Q8NHP8 589 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 TDRD7Q8NHU6 1098 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 MYD88Q99836 296 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 CDCA7Q9BWT1 371 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 VPS18Q9P253 973 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 STAP2Q9UGK3 403 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 PHLPP2Q6ZVD8 1323 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 ATXN2Q99700 1313 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 COL16A1Q07092 1604 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 PLCH1Q4KWH8 1693 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 GLI3P10071 1580 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 KCPQ6ZWJ8 1503 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 DISP2A7MBM2 1401 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 TNS2Q63HR2 1409 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 TTC41PQ6P2S7 1318 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 SALL3Q9BXA9 1300 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 EXOC5O00471 708 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 IGKV5-2P06315 115 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 KIAA1328Q86T90 577 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 RHPN1Q8TCX5 695 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 MMTAG2Q9BU76 263 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 ERC2O15083 957 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 GCKRQ14397 625 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 SF3A1Q15459 793 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 PCDHGA4Q9Y5G9 962 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 CCDC151A5D8V7 595 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 PSDA5PKW4 1024 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 CAVIN2O95810 425 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 SLC8A3P57103 927 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 APOBRQ0VD83 1088 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 IQCA1Q86XH1 822 aa14.49□□□□□ -0.09
RTFDC1-207ENST00000477573 CDKL5O76039 1030 aa14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 DHX8Q14562 1220 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 RCSD1Q6JBY9 416 aa14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 AMOTL1Q8IY63 956 aa14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 MRFAP1L1Q96HT8 127 aa14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 AKAP2Q9Y2D5 859 aa14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-207ENST00000477573 GCKP35557 465 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 LIG3P49916 1009 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 BRD3Q15059 726 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 LRRFIP1Q32MZ4 808 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 FOXD4L5Q5VV16 416 aaPredicted RBP14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 FBXW10Q5XX13 1052 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 SARM1Q6SZW1 724 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 RBM12BQ8IXT5 1001 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 FOXD4L4Q8WXT5 416 aaPredicted RBP14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 SUCLG2Q96I99 432 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 AP1G2O75843 785 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 CCZ1BP86790 482 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 CCZ1P86791 482 aaPredicted RBP14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 ISM2Q6H9L7 571 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 NCAPG2Q86XI2 1143 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 LRRN4CLQ8ND94 238 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 FAM71BQ8TC56 605 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 HNRNPLLQ8WVV9 542 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 IL1RAPL2Q9NP60 686 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 DNAI1Q9UI46 699 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 TOGARAM1Q9Y4F4 1720 aa14.47□□□□□ -0.09
RTFDC1-207ENST00000477573 ARFGEF2Q9Y6D5 1785 aa14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 ADAMTS2O95450 1211 aa14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 PIP4K2AP48426 406 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 NFXL1Q6ZNB6 911 aa14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 CCDC144CPQ8IYA2 1237 aa14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 CLASRPQ8N2M8 674 aaKnown RBP14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 BICC1Q9H694 974 aaKnown RBP14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 LRP6O75581 1613 aa14.46□□□□□ -0.09
RTFDC1-207ENST00000477573 NBPF26B4DH59 902 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 ANKRD65E5RJM6 399 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 NBPF14Q5TI25 921 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 NBPF15Q8N660 670 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 PIGBQ92521 554 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 BATF3Q9NR55 127 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 ATP6V1DQ9Y5K8 247 aa14.46□□□□□ -0.1
RTFDC1-207ENST00000477573 COL15A1P39059 1388 aa14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 STARD3NLO95772 234 aa14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 GSDMDP57764 484 aa14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 G3BP1Q13283 466 aaKnown RBP eCLIP14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 LONRF2Q1L5Z9 754 aa14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 GDPD2Q9HCC8 539 aa14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 ZNF232Q9UNY5 417 aa14.45□□□□□ -0.1
RTFDC1-207ENST00000477573 EME2A4GXA9 379 aaPredicted RBP14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 A1BGP04217 495 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 INPP5BP32019 993 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 RAB27AP51159 221 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 EVCP57679 992 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 PIP4K2BP78356 416 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 HDXQ7Z353 690 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 CEP112Q8N8E3 955 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 RABGGTAQ92696 567 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 GPATCH3Q96I76 525 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 WNK3Q9BYP7 1800 aa14.44□□□□□ -0.1
RTFDC1-207ENST00000477573 EBAG9O00559 213 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms