RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 MIGA1Q8NAN2 632 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 FAM163AQ96GL9 167 aaPredicted RBP19.26■□□□□ 0.67
COPS3-207ENST00000477299 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 GPR75-ASB3A0A0A6YYF3 556 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 TRAF5O00463 557 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 TOMM70O94826 608 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 ADD2P35612 726 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 SPDYE2Q495Y8 402 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 TTC22Q5TAA0 569 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 CHADLQ6NUI6 762 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 USP40Q9NVE5 1235 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
COPS3-207ENST00000477299 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
COPS3-207ENST00000477299 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 ITGBL1O95965 494 aaPredicted RBP19.24■□□□□ 0.67
COPS3-207ENST00000477299 MMP14P50281 582 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 RHBDL3P58872 404 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 NFIAQ12857 509 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 CNTROBQ8N137 903 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 VEZTQ9HBM0 779 aa19.24■□□□□ 0.67
COPS3-207ENST00000477299 TCP10L2B9ZVM9 353 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 LDHCP07864 332 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 GSTO1P78417 241 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 CDAN1Q8IWY9 1227 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 ZFPM1Q8IX07 1006 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 SH3RF3Q8TEJ3 882 aaPredicted RBP19.23■□□□□ 0.67
COPS3-207ENST00000477299 ZC3H15Q8WU90 426 aaKnown RBP19.23■□□□□ 0.67
COPS3-207ENST00000477299 SEC62Q99442 399 aaKnown RBP19.23■□□□□ 0.67
COPS3-207ENST00000477299 FSD1Q9BTV5 496 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 FOCADQ5VW36 1801 aa19.23■□□□□ 0.67
COPS3-207ENST00000477299 RNF113AO15541 343 aaKnown RBP19.22■□□□□ 0.67
COPS3-207ENST00000477299 RBM46Q8TBY0 533 aaKnown RBP19.22■□□□□ 0.67
COPS3-207ENST00000477299 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
COPS3-207ENST00000477299 EVI5LQ96CN4 794 aa19.22■□□□□ 0.67
COPS3-207ENST00000477299 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
COPS3-207ENST00000477299 CNTNAP1P78357 1384 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 SDSP20132 328 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 C1QTNF8P60827 252 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 KRT26Q7Z3Y9 468 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 TRPM7Q96QT4 1865 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 DDX4Q9NQI0 724 aaKnown RBP19.21■□□□□ 0.67
COPS3-207ENST00000477299 FAM198AQ9UFP1 575 aa19.21■□□□□ 0.67
COPS3-207ENST00000477299 MYH1P12882 1939 aa19.2■□□□□ 0.66
COPS3-207ENST00000477299 BAZ2AQ9UIF9 1905 aaKnown RBP19.2■□□□□ 0.66
COPS3-207ENST00000477299 WDHD1O75717 1129 aaPredicted RBP19.2■□□□□ 0.66
COPS3-207ENST00000477299 PPP4CP60510 307 aa19.2■□□□□ 0.66
COPS3-207ENST00000477299 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
COPS3-207ENST00000477299 OSBP2Q969R2 916 aa19.2■□□□□ 0.66
COPS3-207ENST00000477299 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
COPS3-207ENST00000477299 ARMT1Q9H993 441 aa19.2■□□□□ 0.66
COPS3-207ENST00000477299 M0R2C6 588 aa19.19■□□□□ 0.66
COPS3-207ENST00000477299 MYO1BO43795 1136 aa19.19■□□□□ 0.66
COPS3-207ENST00000477299 TCP10Q12799 353 aa19.19■□□□□ 0.66
COPS3-207ENST00000477299 UBE3CQ15386 1083 aa19.19■□□□□ 0.66
COPS3-207ENST00000477299 SMC1BQ8NDV3 1235 aa19.19■□□□□ 0.66
COPS3-207ENST00000477299 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.66
COPS3-207ENST00000477299 TMEM39BQ9GZU3 492 aa19.19■□□□□ 0.66
COPS3-207ENST00000477299 CEP350Q5VT06 3117 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 MAGEB6P1A0A0J9YX57 407 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 PRKAB2O43741 272 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 SLURP2P0DP57 97 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 PICALMQ13492 652 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 RASA3Q14644 834 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 CDC37L1Q7L3B6 337 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 TEX11Q8IYF3 940 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 FAM227BQ96M60 508 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 DEFB129Q9H1M3 183 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 FZD1Q9UP38 647 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
COPS3-207ENST00000477299 MBD4O95243 580 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 NMIQ13287 307 aaPredicted RBP19.17■□□□□ 0.66
COPS3-207ENST00000477299 ZMYM1Q5SVZ6 1142 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 CCDC129Q6ZRS4 1044 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 SULF1Q8IWU6 871 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 TEPSINQ96N21 525 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 PASKQ96RG2 1323 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 RFX7Q2KHR2 1363 aa19.17■□□□□ 0.66
COPS3-207ENST00000477299 A0A0D9SFI3 127 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 BAG3O95817 575 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 NBPF12Q5TAG4 269 aaPredicted RBP19.16■□□□□ 0.66
COPS3-207ENST00000477299 ZSCAN25Q6NSZ9 544 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 SH3BP5LQ7L8J4 393 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 APOBEC3FQ8IUX4 373 aaKnown RBP19.16■□□□□ 0.66
COPS3-207ENST00000477299 MAPKAPK5Q8IW41 473 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 TGFBRAP1Q8WUH2 860 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 APPBP2Q92624 585 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 CDCA5Q96FF9 252 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 SIPA1L1O43166 1804 aa19.16■□□□□ 0.66
COPS3-207ENST00000477299 IGSF3O75054 1194 aa19.15■□□□□ 0.66
COPS3-207ENST00000477299 EVX2Q03828 476 aa19.15■□□□□ 0.66
COPS3-207ENST00000477299 CST9Q5W186 159 aa19.15■□□□□ 0.66
COPS3-207ENST00000477299 SDR42E1Q8WUS8 393 aa19.15■□□□□ 0.66
COPS3-207ENST00000477299 NOL10Q9BSC4 688 aaKnown RBP19.15■□□□□ 0.66
COPS3-207ENST00000477299 IDI2Q9BXS1 227 aa19.15■□□□□ 0.66
COPS3-207ENST00000477299 ZNF408Q9H9D4 720 aa19.15■□□□□ 0.66
COPS3-207ENST00000477299 NAV1Q8NEY1 1877 aa19.14■□□□□ 0.65
COPS3-207ENST00000477299 DDTLA6NHG4 134 aaPredicted RBP19.14■□□□□ 0.65
COPS3-207ENST00000477299 FSTL1Q12841 308 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms