RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 KIAA0556O60303 1618 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 IVLP07476 585 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 PCDH11XQ9BZA7 1347 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 PCDH11YQ9BZA8 1340 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 PTPDC1A2A3K4 754 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 WDR44Q5JSH3 913 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 VPS18Q9P253 973 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 AGTPBP1Q9UPW5 1226 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 CCDC169A6NNP5 214 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 GMNNO75496 209 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 RPUSD2Q8IZ73 545 aaKnown RBP20.87■□□□□ 0.93
VARS2-209ENST00000477288 UBLCP1Q8WVY7 318 aaPredicted RBP20.87■□□□□ 0.93
VARS2-209ENST00000477288 MTRF1LQ9UGC7 380 aaKnown RBP20.87■□□□□ 0.93
VARS2-209ENST00000477288 TTC41PQ6P2S7 1318 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
VARS2-209ENST00000477288 DCAF5Q96JK2 942 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
VARS2-209ENST00000477288 BTG4Q9NY30 223 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 ZNF174Q15697 407 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 KIFC2Q96AC6 838 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 ADAMTS12P58397 1594 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 CAPN2P17655 700 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 NAP1L4Q99733 375 aaKnown RBP20.86■□□□□ 0.93
VARS2-209ENST00000477288 GINS2Q9Y248 185 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 SEL1L2Q5TEA6 688 aa20.86■□□□□ 0.93
VARS2-209ENST00000477288 LEO1Q8WVC0 666 aaPredicted RBP20.86■□□□□ 0.93
VARS2-209ENST00000477288 MRRFQ96E11 262 aaKnown RBP20.86■□□□□ 0.93
VARS2-209ENST00000477288 CCNL1Q9UK58 526 aaPredicted RBP20.86■□□□□ 0.93
VARS2-209ENST00000477288 ASXL1Q8IXJ9 1541 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 RPL13P26373 211 aaKnown RBP20.85■□□□□ 0.93
VARS2-209ENST00000477288 SV2BQ7L1I2 683 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 INF2Q27J81 1249 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 VWA3AA6NCI4 1184 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 PRKG1Q13976 671 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 ABCC10Q5T3U5 1492 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 ALDH3A1P30838 453 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 CCT6AP40227 531 aaKnown RBP20.85■□□□□ 0.93
VARS2-209ENST00000477288 ARHGEF10LQ9HCE6 1279 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 MKRN1Q9UHC7 482 aaKnown RBP20.85■□□□□ 0.93
VARS2-209ENST00000477288 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
VARS2-209ENST00000477288 E7EVH7 732 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 GTF2A1P52655 376 aaPredicted RBP20.84■□□□□ 0.93
VARS2-209ENST00000477288 CALCOCO2Q13137 446 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 BRDTQ58F21 947 aaPredicted RBP20.84■□□□□ 0.93
VARS2-209ENST00000477288 HSPA2P54652 639 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 MTUS1Q9ULD2 1270 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 AK2P54819 239 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 SLC8A3P57103 927 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 EPB41P11171 864 aaKnown RBP20.84■□□□□ 0.93
VARS2-209ENST00000477288 LMTK3Q96Q04 1460 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 IVNS1ABPQ9Y6Y0 642 aa20.84■□□□□ 0.93
VARS2-209ENST00000477288 STX10O60499 249 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 MYCLP12524 364 aaPredicted RBP20.83■□□□□ 0.93
VARS2-209ENST00000477288 SETDB1Q15047 1291 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 DHX32Q7L7V1 743 aaKnown RBP20.83■□□□□ 0.93
VARS2-209ENST00000477288 IQUBQ8NA54 791 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 TESK2Q96S53 571 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 IFNKQ9P0W0 207 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 SAMD15Q9P1V8 674 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 WDR62O43379 1518 aa20.83■□□□□ 0.93
VARS2-209ENST00000477288 NOP56O00567 594 aaKnown RBP20.83■□□□□ 0.92
VARS2-209ENST00000477288 FLT4P35916 1363 aa20.83■□□□□ 0.92
VARS2-209ENST00000477288 HIBADHP31937 336 aaKnown RBP20.82■□□□□ 0.92
VARS2-209ENST00000477288 TYRO3Q06418 890 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 GTPBP4Q9BZE4 634 aaKnown RBP20.82■□□□□ 0.92
VARS2-209ENST00000477288 SMTNP53814 917 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 FAM204AQ9H8W3 233 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 TRAF5O00463 557 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 ERCC5P28715 1186 aaPredicted RBP20.82■□□□□ 0.92
VARS2-209ENST00000477288 FAM89AQ96GI7 184 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 RNMTO43148 476 aaKnown RBP20.82■□□□□ 0.92
VARS2-209ENST00000477288 TNNC1P63316 161 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 C19orf44Q9H6X5 657 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 PCDHB15Q9Y5E8 787 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 GGA1Q9UJY5 639 aa20.82■□□□□ 0.92
VARS2-209ENST00000477288 CTNND2Q9UQB3 1225 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 RFX1P22670 979 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 KIFAP3Q92845 792 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 STRN3Q13033 797 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 TRPC3Q13507 836 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 SYT10Q6XYQ8 523 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 RUFY3Q7L099 469 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 BRAPQ7Z569 592 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 TRIM6Q9C030 488 aaPredicted RBP20.81■□□□□ 0.92
VARS2-209ENST00000477288 STIM2Q9P246 746 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 LUC7L2Q9Y383 392 aaKnown RBP20.81■□□□□ 0.92
VARS2-209ENST00000477288 PARD3Q8TEW0 1356 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 GCP02774 474 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 ITGA6P23229 1130 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 VAV2P52735 878 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 JAKMIP2Q96AA8 810 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 DDX39AO00148 427 aaKnown RBP20.81■□□□□ 0.92
VARS2-209ENST00000477288 ARMT1Q9H993 441 aa20.81■□□□□ 0.92
VARS2-209ENST00000477288 CCNT1O60563 726 aaKnown RBP20.8■□□□□ 0.92
VARS2-209ENST00000477288 HSPA1LP34931 641 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms