RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HUNKP57058 714 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 GPSM2P81274 684 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 Q3C1V9 767 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 USP48Q86UV5 1035 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 AGBL3Q8NEM8 1001 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 TBC1D16Q8TBP0 767 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 CELF1Q92879 486 aaKnown RBP9.29□□□□□ -0.92
BRCA1-214ENST00000477152 GLMNQ92990 594 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 ABHD8Q96I13 439 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 MYD88Q99836 296 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 DBNDD1Q9H9R9 158 aa9.29□□□□□ -0.92
BRCA1-214ENST00000477152 POTEMA6NI47 508 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 UFL1O94874 794 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 KRT24Q2M2I5 525 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 PRKRIP1Q9H875 184 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-214ENST00000477152 GBA2Q9HCG7 927 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-214ENST00000477152 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 XDHP47989 1333 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 YDJCA8MPS7 323 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 APAF1O14727 1248 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 ZNF853P0CG23 659 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 RGMBQ6NW40 437 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 CALR3Q96L12 384 aaKnown RBP9.28□□□□□ -0.92
BRCA1-214ENST00000477152 METTL22Q9BUU2 404 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-214ENST00000477152 PRR14Q9BWN1 585 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 POLLQ9UGP5 575 aa9.28□□□□□ -0.92
BRCA1-214ENST00000477152 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.92
BRCA1-214ENST00000477152 AOC2O75106 756 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 VIL1P09327 827 aaKnown RBP9.27□□□□□ -0.93
BRCA1-214ENST00000477152 FKBP1BP68106 108 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 TBC1D10BQ4KMP7 808 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-214ENST00000477152 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 TRPM4Q8TD43 1214 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 PRDM9Q9NQV7 894 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 MYH3P11055 1940 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 CACNA1FO60840 1977 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 POLR2AP24928 1970 aaKnown RBP9.27□□□□□ -0.93
BRCA1-214ENST00000477152 MYO3BQ8WXR4 1341 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 DUOX1Q9NRD9 1551 aa9.27□□□□□ -0.93
BRCA1-214ENST00000477152 CCDC85CA6NKD9 419 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 NF2P35240 595 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 HIRAP54198 1017 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-214ENST00000477152 LYPD8Q6UX82 237 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 KSR2Q6VAB6 950 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-214ENST00000477152 ZNF609O15014 1411 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 ELL2O00472 640 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-214ENST00000477152 IGHMBP2P38935 993 aaKnown RBP9.26□□□□□ -0.93
BRCA1-214ENST00000477152 ZNF157P51786 506 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-214ENST00000477152 FMR1Q06787 632 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-214ENST00000477152 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 MYH16Q9H6N6 1097 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 MAP10Q9P2G4 905 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
BRCA1-214ENST00000477152 PSME4Q14997 1843 aa9.25□□□□□ -0.93
BRCA1-214ENST00000477152 TLL1O43897 1013 aa9.25□□□□□ -0.93
BRCA1-214ENST00000477152 FMNL1O95466 1100 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-214ENST00000477152 MLLT1Q03111 559 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-214ENST00000477152 FAM160A2Q8N612 972 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-214ENST00000477152 ANKRD2Q9GZV1 360 aa9.25□□□□□ -0.93
BRCA1-214ENST00000477152 PHAXQ9H814 394 aaKnown RBP9.25□□□□□ -0.93
BRCA1-214ENST00000477152 HDAC9Q9UKV0 1011 aa9.25□□□□□ -0.93
BRCA1-214ENST00000477152 MAP3K2Q9Y2U5 619 aa9.25□□□□□ -0.93
BRCA1-214ENST00000477152 NR1I2O75469 434 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 PTPN5P54829 565 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 CTSWP56202 376 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 BSDC1Q9NW68 430 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-214ENST00000477152 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 LEMD3Q9Y2U8 911 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 ZNF280AP59817 542 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-214ENST00000477152 DGKZQ13574 1117 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 MPHOSPH8Q99549 860 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 GGA3Q9NZ52 723 aa9.24□□□□□ -0.93
BRCA1-214ENST00000477152 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-214ENST00000477152 KCNJ4P48050 445 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 SCARF1Q14162 830 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 ZNF428Q96B54 188 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 COA1Q9GZY4 146 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 MYOZ2Q9NPC6 264 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 IL16Q14005 1332 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 RTL9Q8NET4 1388 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 PI4KAP2A4QPH2 592 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-214ENST00000477152 TWISTNBQ3B726 338 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-214ENST00000477152 SLC51AQ86UW1 340 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 PI4KAP1Q8N8J0 262 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 C8orf58Q8NAV2 365 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 CDCA5Q96FF9 252 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 SPSB2Q99619 263 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms