RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LIFRP42702 1097 aa13.45□□□□□ -0.26
NUP188-205ENST00000477069 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
NUP188-205ENST00000477069 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
NUP188-205ENST00000477069 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
NUP188-205ENST00000477069 ORC3Q9UBD5 711 aaPredicted RBP13.45□□□□□ -0.26
NUP188-205ENST00000477069 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
NUP188-205ENST00000477069 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
NUP188-205ENST00000477069 BAZ2AQ9UIF9 1905 aaKnown RBP13.45□□□□□ -0.26
NUP188-205ENST00000477069 PDS5AQ29RF7 1337 aaKnown RBP13.45□□□□□ -0.26
NUP188-205ENST00000477069 FAM84BQ96KN1 310 aaPredicted RBP13.45□□□□□ -0.26
NUP188-205ENST00000477069 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
NUP188-205ENST00000477069 IRS2Q9Y4H2 1338 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 ZBTB22O15209 634 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 CDC27P30260 824 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 NTRK3Q16288 839 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 FBXO33Q7Z6M2 555 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 ZNF396Q96N95 335 aaPredicted RBP13.44□□□□□ -0.26
NUP188-205ENST00000477069 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
NUP188-205ENST00000477069 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 FAM217BQ9NTX9 383 aaPredicted RBP13.44□□□□□ -0.26
NUP188-205ENST00000477069 ZSWIM5Q9P217 1185 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 LRP2BPQ9P2M1 347 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 GOLGA6L4A6NEF3 574 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 TM4SF1P30408 202 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
NUP188-205ENST00000477069 FAM182BQ5T319 152 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 ZNF384Q8TF68 577 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
NUP188-205ENST00000477069 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
NUP188-205ENST00000477069 GNL3LQ9NVN8 582 aaKnown RBP13.44□□□□□ -0.26
NUP188-205ENST00000477069 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
NUP188-205ENST00000477069 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 CAMK4Q16566 473 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 KRT23Q9C075 422 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 TNMDQ9H2S6 317 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 RTEL1Q9NZ71 1219 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 KLRK1P26718 216 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 MIGA1Q8NAN2 632 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 GJD4Q96KN9 370 aaPredicted RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 NACAP1Q9BZK3 213 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 GOLPH3LQ9H4A5 285 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 ANAPC4Q9UJX5 808 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 CPLX1O14810 134 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 SEMA3EO15041 775 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 KDM4AO75164 1064 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 ZPR1O75312 459 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 CYP7A1P22680 504 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 RPS8P62241 208 aaKnown RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 TYRO3Q06418 890 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 SNW1Q13573 536 aaKnown RBP13.43□□□□□ -0.26
NUP188-205ENST00000477069 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 NLRP3Q96P20 1036 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 MTA3Q9BTC8 594 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 GJB4Q9NTQ9 266 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 USP25Q9UHP3 1055 aa13.43□□□□□ -0.26
NUP188-205ENST00000477069 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
NUP188-205ENST00000477069 MFSD6Q6ZSS7 791 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 ENGASEQ8NFI3 743 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 CCDC39Q9UFE4 941 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 ZBTB43O43298 467 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 AP5Z1O43299 807 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 RANBP6O60518 1105 aaKnown RBP13.42□□□□□ -0.26
NUP188-205ENST00000477069 TDO2P48775 406 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
NUP188-205ENST00000477069 STK36Q9NRP7 1315 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 CDKL5O76039 1030 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 RXRAP19793 462 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
NUP188-205ENST00000477069 TPTE2Q6XPS3 522 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 PPARAQ07869 468 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
NUP188-205ENST00000477069 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 LINC00301Q8NCQ3 95 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 MYH2Q9UKX2 1941 aa13.41□□□□□ -0.26
NUP188-205ENST00000477069 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 MICU3Q86XE3 530 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 ANKRD2Q9GZV1 360 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 ABCF2Q9UG63 623 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 IFIT3O14879 490 aaKnown RBP13.4□□□□□ -0.26
NUP188-205ENST00000477069 YEATS4O95619 227 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 SDR42E1Q8WUS8 393 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
NUP188-205ENST00000477069 BRWD3Q6RI45 1802 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms